DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lztr1 and AT1G74150

DIOPT Version :9

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_177555.3 Gene:AT1G74150 / 843755 AraportID:AT1G74150 Length:569 Species:Arabidopsis thaliana


Alignment Length:464 Identity:118/464 - (25%)
Similarity:178/464 - (38%) Gaps:117/464 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 QWTRML-----ECAEFVGAKRSKHTVVAYKDA--MFVFGGDNGKNMLNDLIR-FGVKDKSWGRAC 293
            :|.|:.     :.:.|...||..||..|.|..  ::||||....|.|.:.:. |..:.:.|.|..
plant     2 RWERVQQVGLGDSSSFGPGKRWGHTCNAIKGGRFLYVFGGFGRDNCLTNQVHVFDAETQIWIRPE 66

  Fly   294 ATGTPPAPRYHHSAVVAGSSMFIFGG-----YTGDIHSNSNLTNKNDLFEYKFQSAMWVEWKFSG 353
            ..|.||.||..||....|.::|:|||     |..|:|.         |..|   |..|:.....|
plant    67 INGVPPCPRDSHSCTTVGDNLFVFGGTDGTKYLNDVHI---------LDTY---SHTWIRPDIRG 119

  Fly   354 RQPVPRSAHGAAVYDNKMWIYAG------YDGNARLNDMWTLNLTGENQWEEVDQLGDRPPTCCN 412
            ..|..|.||.||:.|.:::|:.|      .|.....||::.|| |....|:.....| :||:   
plant   120 EGPRVREAHSAALVDKRLFIFGGCGKSSDSDDEVFYNDLYILN-TETYMWKRAVTSG-KPPS--- 179

  Fly   413 FPVAVARDAMYVFSGQSGLQITNS-------LFEFHFKTR---TWRRISNEPVLRGATSAPPSRR 467
                 |||:....:.::.:.:...       |.:.|....   .|:.:...    |....|   |
plant   180 -----ARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILDTDKFVWKELKTS----GQVLTP---R 232

  Fly   468 YGHTMVHHDRFLYVFGGSADS-TLPNDLHCYDLDSQVWSVIQPEQNSDVPSGRVFHASAVICDAM 531
            .||..|..:|.|:||||..|| .|.:||:..||::.|||.:......  ||.|  .:||.:|   
plant   233 AGHVTVALERNLFVFGGFTDSQNLYDDLYVLDLETGVWSKVVAMVEG--PSAR--FSSAAVC--- 290

  Fly   532 YIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFQDKQFCDIQFIVGA-EEIRILAHIAFVA 595
                         .|.|:              .|.||         |:.|. :.:..|..|.::.
plant   291 -------------LDPYK--------------AGSFF---------FVGGCNKNLEPLDDIYYLH 319

  Fly   596 ARSKY-LRNKILAAREARQQQMEKVYGVGQVDALA------------LNAGAGGDRGPMLEVRLA 647
            ...:| :|......|.:.::|| |:...||...:|            ||.|....|.||.:.|:.
plant   320 TEGRYDVRFHQNPGRSSLRKQM-KLKCQGQELTVAKTNIDHGRENVPLNIGYIDQRKPMFQARVT 383

  Fly   648 NASPEAFEI 656
            ..:|..:.|
plant   384 ENAPLGYTI 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 PLN02153 237..554 CDD:177814 93/346 (27%)
KELCH repeat 252..298 CDD:276965 15/48 (31%)
Kelch_3 261..310 CDD:290151 17/51 (33%)
Kelch_5 299..>329 CDD:290565 13/34 (38%)
KELCH repeat 302..355 CDD:276965 16/57 (28%)
Kelch_1 358..400 CDD:279660 15/47 (32%)
KELCH repeat 359..407 CDD:276965 16/53 (30%)
KELCH repeat 410..455 CDD:276965 6/54 (11%)
Kelch_1 410..452 CDD:279660 6/51 (12%)
Kelch_1 466..509 CDD:279660 20/43 (47%)
KELCH repeat 467..509 CDD:276965 20/42 (48%)
BTB 564..704 CDD:279045 25/107 (23%)
BTB 575..707 CDD:197585 22/96 (23%)
SPOP_C_like 707..766 CDD:269810
BTB 798..898 CDD:279045
BTB 802..902 CDD:197585
SPOP_C_like 902..960 CDD:269810
AT1G74150NP_177555.3 PLN02153 3..317 CDD:177814 100/385 (26%)
KELCH repeat 22..72 CDD:276965 15/49 (31%)
Kelch_3 33..81 CDD:290151 16/47 (34%)
Kelch_1 74..114 CDD:279660 16/51 (31%)
KELCH repeat 75..122 CDD:276965 16/58 (28%)
KELCH repeat 125..170 CDD:276965 15/45 (33%)
Kelch_3 134..189 CDD:290151 16/64 (25%)
KELCH repeat 181..227 CDD:276965 5/49 (10%)
Kelch_2 181..223 CDD:284956 5/41 (12%)
KELCH repeat 232..276 CDD:276965 20/43 (47%)
Kelch_3 244..292 CDD:290151 21/67 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263405at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.