DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and AT4G04670

DIOPT Version :9

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_567268.2 Gene:AT4G04670 / 825800 AraportID:AT4G04670 Length:995 Species:Arabidopsis thaliana


Alignment Length:521 Identity:104/521 - (19%)
Similarity:178/521 - (34%) Gaps:136/521 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LGSSSISSGLSAVCGFVTGASGGGGFERDRDRDRGLANISGGSTPAGILYCPACMAAANQQSPSQ 112
            |||:.....|:...||               |:.|:.:...|......:.|...|......:...
plant   127 LGSAQFLVALAISAGF---------------RESGITSCGDGKRVIIAIRCSIRMEVPIGDTEKL 176

  Fly   113 NSSPHHESFFLRSSFKSSKRNKARKSASTAGC------------LDAQHIRANLRMSMSSSMRSS 165
            ..||.:..|.:..:.:....|:.|....:...            :|......||..:..||:  :
plant   177 MVSPEYVKFLVDIANEKMDANRKRTDGFSVALASNGFKNPDENDVDEDDNYENLAANHDSSI--N 239

  Fly   166 RGNGGGGAASSSHPPGSSCSSGP--------GGSGCSM-AYDAASNASSGSGSGSGK-------- 213
            .||...|......|.......|.        |.|.|:: ..|.......|...|.|:        
plant   240 NGNLYPGVQKELIPLEKLSIVGEPVEKLHLWGHSACTIDESDRKEVIVFGGFGGFGRHARRNESL 304

  Fly   214 ATSPGSYSCNALNVDFTSYTATHQWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGG-DNGKNMLN 277
            ..:|   ||..|              :::...|...| |..||.....|.|||.|| .:..|:||
plant   305 LLNP---SCGTL--------------KLIAVNESPSA-RLGHTASMVGDFMFVIGGRADPLNILN 351

  Fly   278 DLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGG-YTGDIHSNSNLTNKNDLFEYKF 341
            |:.|..:....|......|:...||:.|:|...|:.::|||| |...|.|:.::.:..||     
plant   352 DVWRLDISTGEWSSQRCVGSEFPPRHRHAAASVGTKVYIFGGLYNDKIVSSMHILDTKDL----- 411

  Fly   342 QSAMWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENQWEEVDQLGDR 406
               .|.|.:..|:.|..|.:|....|.::.:::.||:|...|||:::.::..             
plant   412 ---QWKEVEQQGQWPCARHSHAMVAYGSQSFMFGGYNGENVLNDLYSFDVQS------------- 460

  Fly   407 PPTCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHT 471
                |::       .:.|.||:                  |                |..|:.|:
plant   461 ----CSW-------KLEVISGK------------------W----------------PHARFSHS 480

  Fly   472 MVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVIQPE-QNSDVPSGRVFHASAVICDAMYIFG 535
            |..:...:.:.||...|....:|...||..::|..::.| .|.::   .|...::::.|.:.:.|
plant   481 MFVYKHTIGIIGGCPVSQNCQELTLLDLKHRLWRSVRLEFMNKEL---FVRSTASILGDDLIVIG 542

  Fly   536 G 536
            |
plant   543 G 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 PLN02153 237..554 CDD:177814 67/303 (22%)
KELCH repeat 252..298 CDD:276965 16/46 (35%)
Kelch_3 261..310 CDD:290151 17/49 (35%)
Kelch_5 299..>329 CDD:290565 12/30 (40%)
KELCH repeat 302..355 CDD:276965 16/53 (30%)
Kelch_1 358..400 CDD:279660 9/41 (22%)
KELCH repeat 359..407 CDD:276965 9/47 (19%)
KELCH repeat 410..455 CDD:276965 5/44 (11%)
Kelch_1 410..452 CDD:279660 5/41 (12%)
Kelch_1 466..509 CDD:279660 10/42 (24%)
KELCH repeat 467..509 CDD:276965 10/41 (24%)
BTB 564..704 CDD:279045
BTB 575..707 CDD:197585
SPOP_C_like 707..766 CDD:269810
BTB 798..898 CDD:279045
BTB 802..902 CDD:197585
SPOP_C_like 902..960 CDD:269810
AT4G04670NP_567268.2 TYW3 6..210 CDD:280785 16/97 (16%)
KELCH repeat 325..372 CDD:276965 16/46 (35%)
Kelch_3 334..384 CDD:290151 17/49 (35%)
Kelch_1 375..416 CDD:279660 15/48 (31%)
KELCH repeat 376..423 CDD:276965 16/54 (30%)
KELCH repeat 426..464 CDD:276965 10/61 (16%)
Kelch_3 439..484 CDD:290151 15/102 (15%)
KELCH repeat 476..516 CDD:276965 10/39 (26%)
Met_10 736..936 CDD:280612
AdoMet_MTases 841..938 CDD:100107
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263405at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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