DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and NSP4

DIOPT Version :10

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_188262.1 Gene:NSP4 / 820888 AraportID:AT3G16410 Length:619 Species:Arabidopsis thaliana


Alignment Length:342 Identity:75/342 - (21%)
Similarity:123/342 - (35%) Gaps:101/342 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 QWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLND--LIRFGVKDKSWGRACATGTPP 299
            :||::.|..:..|. |..|.:....:.::.|||:...|...|  |..|.::.::|..:.|||..|
plant   301 KWTKVDENGDGPGL-RCSHDIAQVGNKIYSFGGEFTPNQPIDKHLYVFDIESRTWSISPATGDIP 364

  Fly   300 APRYHHSAVVA-GSSMFIFGG------YTGDIHSNSNLTNKNDLFEYKFQSAMWVEWKF-----S 352
            ........:|: ||::::|||      |.| .:|....||               |||.     .
plant   365 TLSCLGVCMVSIGSTLYVFGGRDASRQYNG-FYSFDTTTN---------------EWKLLTPVEE 413

  Fly   353 GRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTG------------------------ 393
            |  |.|||.|..|..:..::::.|....||||.:.:.|:..                        
plant   414 G--PTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWFHCSTPGDSLTARGGAGLEVV 476

  Fly   394 ------------------------ENQWEEVDQLGDRPPTCCNFPVAVARDAMYVFSGQSGL--- 431
                                    :::|.:|:..|.||.....|..|.....:.:|.|:..:   
plant   477 QGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAALGKHIVIFGGEIAMDPL 541

  Fly   432 ------QITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHT-----MVHHDRFLYVFGGS 485
                  |:|:..|....:|..|.|:..   ..|....|.||  |.|     .:...:.|.:.||.
plant   542 AHVGPGQLTDGTFALDTETLQWERLDK---FGGEEETPSSR--GWTASTTATIGGKKGLVMHGGK 601

  Fly   486 ADST-LPNDLHCYDLDS 501
            |.:. ..:||..|.:||
plant   602 APTNDRFDDLFFYGIDS 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 NanM 252..551 CDD:442289 71/327 (22%)
KELCH repeat 252..298 CDD:276965 13/47 (28%)
KELCH repeat 302..355 CDD:276965 15/64 (23%)
KELCH repeat 359..407 CDD:276965 13/95 (14%)
KELCH repeat 410..455 CDD:276965 10/53 (19%)
KELCH repeat 467..509 CDD:276965 11/41 (27%)
BTB1_POZ_LZTR1 551..704 CDD:349617
BACK1_LZTR1 708..766 CDD:350580
BTB2_POZ_LZTR1 781..906 CDD:349618
BACK2_LZTR1 902..962 CDD:350581
NSP4NP_188262.1 Jacalin 13..142 CDD:396138
PLN02193 150..619 CDD:177844 75/342 (22%)
KELCH repeat 315..363 CDD:276965 13/47 (28%)
KELCH repeat 370..414 CDD:276965 14/59 (24%)
KELCH repeat 418..465 CDD:276965 10/46 (22%)
KELCH repeat 468..507 CDD:276965 1/38 (3%)
KELCH repeat 517..566 CDD:276965 9/48 (19%)
Blue background indicates that the domain is not in the aligned region.

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