DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lztr1 and lztr1

DIOPT Version :9

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001074074.1 Gene:lztr1 / 792832 ZFINID:ZDB-GENE-030131-9564 Length:776 Species:Danio rerio


Alignment Length:758 Identity:426/758 - (56%)
Similarity:555/758 - (73%) Gaps:24/758 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 YSCN----ALNVDFTSYTATHQWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLNDLI 280
            :||:    .|.::|..:...|:|.|:..|.|||||:|||||||||:||::||||||||||||||:
Zfish    15 HSCSDSVEYLTLNFGPFETVHRWRRLPPCDEFVGARRSKHTVVAYRDAIYVFGGDNGKNMLNDLL 79

  Fly   281 RFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFQSAM 345
            ||.|||.||.||..|||||||||||||||.|||||:||||||||:|||||.||||||||||.:..
Zfish    80 RFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDLFEYKFATGQ 144

  Fly   346 WVEWKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENQ--WEEVDQLGDRPP 408
            |.|||..||. |.||||||.||::|:||:||||||||||||||:.|....|  |||::|.|:.||
Zfish   145 WTEWKVEGRL-VARSAHGATVYNDKLWIFAGYDGNARLNDMWTIGLQDREQAYWEEIEQSGEIPP 208

  Fly   409 TCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHTMV 473
            :||||||||..|.|:|||||||.:|||:||:|.||...|.||..|.:||| :..||.||||||||
Zfish   209 SCCNFPVAVCWDKMFVFSGQSGAKITNNLFQFEFKGHIWTRIPTEHLLRG-SPPPPQRRYGHTMV 272

  Fly   474 HHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVIQPEQNSDVPSGRVFHASAVICDAMYIFGGTV 538
            ..||.||||||:||:||||:|||||:|||.|.||||..:|::||||:|||:|||.||||||||||
Zfish   273 AFDRHLYVFGGAADNTLPNELHCYDVDSQTWEVIQPSTDSEMPSGRLFHAAAVIHDAMYIFGGTV 337

  Fly   539 DNSVRRGDTYRFQFSSYPKCTLRDDFGKFFQDKQFCDIQFIVGAEEIRILAHIAFVAARSKYLRN 603
            ||:||.|:.||||||.||||||.:|:||.::::||||::||:|..|.::|.|||.|.||.|:||.
Zfish   338 DNNVRSGEMYRFQFSCYPKCTLHEDYGKLWENRQFCDVEFILGEREEKVLGHIAIVTARCKWLRK 402

  Fly   604 KILAAREARQQQMEKVYGVGQVDALALNAGAG--------GDRG-PMLEVRLANASPEAFEIILN 659
            |||.||: ||:|..|:....:.|    .:|:|        ..|| |:|||.:..|..:.||:::.
Zfish   403 KILQARD-RQKQKSKLECNEESD----ESGSGSQKDCSGRSSRGPPLLEVSIREADAQPFEVLMQ 462

  Fly   660 YIYTDRIDLKDTYSKNIIILITDIYQLAGLFTMPRLAHGCIQYLDYKINKLNVLEALYNADKSNI 724
            ::|||:|..........::||.|:|:||..|.:.||...|:||::..::..|||....||||..:
Zfish   463 FLYTDKIQYPRRGHVQDVLLIMDVYKLALSFKLSRLEQLCVQYIEASVDLQNVLSVCENADKLQL 527

  Fly   725 KIIKDHCMQFIIKEENFTDVVMSSEFSDLDKPLLVEIIRKRLYPSKLVIDTSYEGNIGTTLEIDL 789
            ..:|:||:.|::||.:|..|:|:.||..|..||:|||:|::..|...|. :....:|||:|..|:
Zfish   528 DQLKEHCLNFVVKESHFNQVIMTKEFEHLSTPLIVEIVRRKQQPPPRVY-SDQPVDIGTSLVQDM 591

  Fly   790 CAFLESTGKDFCDISLVLEDHVIPAHKSVLSSRCTYFQGMFRSFMPPDNTVNIQIGEISPSLEAF 854
            .|:||..|.:||||.|:|:.|..||||::|::|.:||:.|||||||.|..|||.|||:.||.:||
Zfish   592 KAYLEGAGHEFCDIILLLDGHPRPAHKAILAARSSYFEAMFRSFMPEDGQVNISIGEMVPSTQAF 656

  Fly   855 HSLLRYIYYGETKMPPQDALYLFQAPCFYGLANNRLHAFCKYSLEHNITFENVLQTLEASDITKI 919
            .|:|||||||:..|||:|:||||.||.:||.:||||.|:||.:||.|:|.|||||.|||:|.|:.
Zfish   657 ESMLRYIYYGDVDMPPEDSLYLFAAPYYYGFSNNRLQAYCKQNLEMNVTVENVLQILEAADKTQA 721

  Fly   920 YDIKEYALKLIVKDFAKVARLPKIAGLSRELLLEIIRAVADSH 962
            .|:|::.|.:||..|.||::||.:..||:.|||:||.::| ||
Zfish   722 LDMKKHCLHIIVHQFTKVSKLPNLRSLSQPLLLDIIDSLA-SH 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 PLN02153 237..554 CDD:177814 226/318 (71%)
KELCH repeat 252..298 CDD:276965 36/45 (80%)
Kelch_3 261..310 CDD:290151 39/48 (81%)
Kelch_5 299..>329 CDD:290565 26/29 (90%)
KELCH repeat 302..355 CDD:276965 41/52 (79%)
Kelch_1 358..400 CDD:279660 29/43 (67%)
KELCH repeat 359..407 CDD:276965 32/49 (65%)
KELCH repeat 410..455 CDD:276965 29/44 (66%)
Kelch_1 410..452 CDD:279660 28/41 (68%)
Kelch_1 466..509 CDD:279660 33/42 (79%)
KELCH repeat 467..509 CDD:276965 32/41 (78%)
BTB 564..704 CDD:279045 57/148 (39%)
BTB 575..707 CDD:197585 52/140 (37%)
SPOP_C_like 707..766 CDD:269810 25/58 (43%)
BTB 798..898 CDD:279045 60/99 (61%)
BTB 802..902 CDD:197585 60/99 (61%)
SPOP_C_like 902..960 CDD:269810 28/57 (49%)
lztr1NP_001074074.1 PLN02153 51..347 CDD:177814 213/297 (72%)
KELCH repeat 51..97 CDD:276965 36/45 (80%)
Kelch_3 60..109 CDD:290151 39/48 (81%)
Kelch_5 98..>128 CDD:290565 26/29 (90%)
KELCH repeat 101..154 CDD:276965 41/52 (79%)
Kelch_1 156..200 CDD:279660 29/43 (67%)
Kelch_3 220..274 CDD:290151 34/54 (63%)
KELCH repeat 266..308 CDD:276965 32/41 (78%)
Kelch_3 278..326 CDD:290151 34/47 (72%)
BTB 363..506 CDD:295341 56/147 (38%)
SPOP_C_like 510..570 CDD:269810 25/59 (42%)
BTB 600..685 CDD:279045 51/84 (61%)
BTB 604..701 CDD:197585 58/96 (60%)
SPOP_C_like 704..762 CDD:269810 29/58 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579548
Domainoid 1 1.000 138 1.000 Domainoid score I4839
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4925
Inparanoid 1 1.050 870 1.000 Inparanoid score I397
OMA 1 1.010 - - QHG54540
OrthoDB 1 1.010 - - D1263405at2759
OrthoFinder 1 1.000 - - FOG0008427
OrthoInspector 1 1.000 - - oto40606
orthoMCL 1 0.900 - - OOG6_101111
Panther 1 1.100 - - LDO PTHR46376
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 1 1.000 - - X3027
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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