DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and Klhdc3

DIOPT Version :10

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_082186.2 Gene:Klhdc3 / 71765 MGIID:2651568 Length:382 Species:Mus musculus


Alignment Length:406 Identity:99/406 - (24%)
Similarity:153/406 - (37%) Gaps:109/406 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 QWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGG-DNGKNMLN----DLIRFGVKDKSWGRACATG 296
            :||..||    .|.:|..|..||....::.||| .:|::...    |:..|......|     |.
Mouse     3 RWTVHLE----GGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRW-----TK 58

  Fly   297 TPP--------AP-----RYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFQSAMWVE 348
            .||        ||     ||.||.|:...::|::|| ..|.....|:     |:.:...:..|..
Mouse    59 LPPVRPAVRGQAPVVPYMRYGHSTVLIDDTVFLWGG-RNDTEGACNV-----LYAFDVNTHKWST 117

  Fly   349 WKFSGRQPVPRSAHGAAVYDNKMWIYAGYD--GNARLNDM---------WTLNLTGEN--QWEE- 399
            .:.||..|..|..|.|.|....|:|:.||:  .:...||:         |||..|..|  :|.: 
Mouse   118 PRVSGAVPGARDGHSACVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTKGNPARWRDF 182

  Fly   400 --VDQLGDRPPTCCNFPVAVARDAMYVFSGQ--------SGLQI-TNSLFEFHFKTRTWRRISNE 453
              ...||:.               ||||.|:        |..:| .|.:..|..:|..|....:.
Mouse   183 HSATMLGNH---------------MYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPHT 232

  Fly   454 PVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDL-----DSQVWSVIQPEQNS 513
            |||       |..|..|:...::..||:||| .::.|  :.|.:||     .|..|..|:|:...
Mouse   233 PVL-------PEGRRSHSAFGYNGELYIFGG-YNARL--NRHFHDLWKFNPGSFTWKKIEPKGKG 287

  Fly   514 DVPSGRVFHASAVICDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFQDKQFCDIQF 578
            ..|..|  ....::.|.:.:||||               |..|:..|.|:|...    ...|:..
Mouse   288 PCPRRR--QCCCIVGDKIVLFGGT---------------SPSPEEGLGDEFDLI----DHSDLHI 331

  Fly   579 IVGAEEIRILAHIAFV 594
            :..:..::.|..:|.:
Mouse   332 LDFSPSLKTLCKLAVI 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 NanM 252..551 CDD:442289 86/346 (25%)
KELCH repeat 252..298 CDD:276965 12/50 (24%)
KELCH repeat 302..355 CDD:276965 14/52 (27%)
KELCH repeat 359..407 CDD:276965 18/63 (29%)
KELCH repeat 410..455 CDD:276965 11/53 (21%)
KELCH repeat 467..509 CDD:276965 14/46 (30%)
BTB1_POZ_LZTR1 551..704 CDD:349617 8/44 (18%)
BACK1_LZTR1 708..766 CDD:350580
BTB2_POZ_LZTR1 781..906 CDD:349618
BACK2_LZTR1 902..962 CDD:350581
Klhdc3NP_082186.2 NanM 14..308 CDD:442289 83/331 (25%)
KELCH repeat 14..62 CDD:276965 13/52 (25%)
Kelch 1 25..77 12/56 (21%)
KELCH repeat 77..124 CDD:276965 14/52 (27%)
Kelch 2 88..138 14/55 (25%)
KELCH repeat 128..173 CDD:276965 13/44 (30%)
Kelch 3 139..189 12/49 (24%)
KELCH repeat 180..236 CDD:276965 16/77 (21%)
Kelch 4 191..249 17/79 (22%)
KELCH repeat 239..283 CDD:276965 14/46 (30%)
Kelch 5 251..301 15/54 (28%)
Blue background indicates that the domain is not in the aligned region.

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