DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and klhdc4

DIOPT Version :9

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001119902.1 Gene:klhdc4 / 569887 ZFINID:ZDB-GENE-030131-2057 Length:585 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 PLN02153 237..554 CDD:177814
KELCH repeat 252..298 CDD:276965
Kelch_3 261..310 CDD:290151
Kelch_5 299..>329 CDD:290565
KELCH repeat 302..355 CDD:276965
Kelch_1 358..400 CDD:279660
KELCH repeat 359..407 CDD:276965
KELCH repeat 410..455 CDD:276965
Kelch_1 410..452 CDD:279660
Kelch_1 466..509 CDD:279660
KELCH repeat 467..509 CDD:276965
BTB 564..704 CDD:279045
BTB 575..707 CDD:197585
SPOP_C_like 707..766 CDD:269810
BTB 798..898 CDD:279045
BTB 802..902 CDD:197585
SPOP_C_like 902..960 CDD:269810
klhdc4NP_001119902.1 Kelch_4 63..117 CDD:290154
KELCH repeat 64..115 CDD:276965
KELCH repeat 119..174 CDD:276965
Kelch_3 131..184 CDD:290151
KELCH repeat 177..226 CDD:276965
Kelch_3 186..237 CDD:290151
KELCH repeat 231..295 CDD:276965
Kelch_4 297..344 CDD:290154
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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