DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and hcfc2

DIOPT Version :10

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001314768.1 Gene:hcfc2 / 550401 ZFINID:ZDB-GENE-050417-203 Length:708 Species:Danio rerio


Alignment Length:392 Identity:93/392 - (23%)
Similarity:144/392 - (36%) Gaps:119/392 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 WTRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPR 302
            |.|:...|..|...|..|..||.::.:.||||.| :.:..||..:....|.|......|..|...
Zfish     8 WKRVRSYAGPVPRARHGHRAVAIRELLVVFGGGN-EGIATDLHVYNSVTKQWFLPAVRGDIPPGC 71

  Fly   303 YHHSAVVAGSSMFIFGG------YTGDIHSNSNLTNKNDLFEYKFQSAMWVEWK-------FSGR 354
            ..|..|..|:.:.:|||      ||..:              |:.|::.|: ||       .:|.
Zfish    72 AAHGFVCEGTRILVFGGMVEFGQYTNSL--------------YELQASRWL-WKKLKPRPPKNGS 121

  Fly   355 QPVPRSAHGAAVYDNKMWIYAGY-------DGN--ARLNDMWTLNL---TGENQWEEVDQLGDRP 407
            .|.||..|...::.||.:::.|.       :||  ..|:|.:.|.|   :|...|...:..|..|
Zfish   122 LPCPRIGHSFTLHANKCYLFGGMANDSEDPNGNIPRYLDDFYELELQAQSGVKGWNVPETKGGGP 186

  Fly   408 PTCCNFPVAVARDA---------------MYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLR 457
            .         ||::               :|:|.|..|.:: |.|::...:|.||          
Zfish   187 S---------ARESHSSVVYCGKGGSSPRLYIFGGMCGDRL-NDLWQLDIETMTW---------- 231

  Fly   458 GATSAPPSR------RYGHTMVHHDRFLYVFGG-----------SADST---LPNDLHCYDLDSQ 502
               |.||:|      |..||.......||||||           :||..   ..|.|...:.|:.
Zfish   232 ---SLPPTRGQLPLPRSLHTSNVIGNKLYVFGGWVPIGEEEEALAADGVKWICTNSLSMLNFDTL 293

  Fly   503 VWSVIQPEQ-----------NSDVPSGRVFHASAVICDAMYIFGGTVDNSVRRGDTYRFQFSSYP 556
            .|..:.||:           |:|.|..|..|.:..:...:.|:.|.        |.|: ::::|.
Zfish   294 TWHNLTPEEHQQGLVEQDENNADWPRARAGHCAVTVGSRLCIWSGR--------DGYK-KYNNYQ 349

  Fly   557 KC 558
            .|
Zfish   350 VC 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 NanM 252..551 CDD:442289 87/369 (24%)
KELCH repeat 252..298 CDD:276965 14/45 (31%)
KELCH repeat 302..355 CDD:276965 14/65 (22%)
KELCH repeat 359..407 CDD:276965 14/59 (24%)
KELCH repeat 410..455 CDD:276965 11/59 (19%)
KELCH repeat 467..509 CDD:276965 15/55 (27%)
BTB1_POZ_LZTR1 551..704 CDD:349617 2/8 (25%)
BACK1_LZTR1 708..766 CDD:350580
BTB2_POZ_LZTR1 781..906 CDD:349618
BACK2_LZTR1 902..962 CDD:350581
hcfc2NP_001314768.1 KELCH repeat 244..318 CDD:276965 19/73 (26%)
FN3 <539..>675 CDD:442628
NanM 8..263 CDD:442289 74/293 (25%)
KELCH repeat 22..60 CDD:276965 13/38 (34%)
KELCH repeat 72..122 CDD:276965 14/64 (22%)
KELCH repeat 126..186 CDD:276965 14/59 (24%)
NanM 186..>350 CDD:442289 43/195 (22%)
KELCH repeat 189..240 CDD:276965 14/64 (22%)
Blue background indicates that the domain is not in the aligned region.

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