DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and rabepk

DIOPT Version :10

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001002209.1 Gene:rabepk / 431756 ZFINID:ZDB-GENE-040704-52 Length:351 Species:Danio rerio


Alignment Length:339 Identity:91/339 - (26%)
Similarity:142/339 - (41%) Gaps:60/339 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 PPGSSCSSGPG---GSGCSMAYDAASNASSGSGSGS----GKATSPGSYSCN-ALNVDFTSYTAT 235
            |.|::    ||   |..||....|..:...|.|.|.    |.|...||::.: .:|:|      |
Zfish    23 PTGAA----PGVSVGHTCSFLPAAHHHDEDGGGKGKIVIVGGANPSGSFADSYIINLD------T 77

  Fly   236 HQWTRMLECAEFVGAK-RSKH---TVVAYKDAMFVFGG---DNGKNMLNDLIRF---GVKDKSWG 290
            |||    :..::.|.: |.:|   |..:...:::||||   ...:|.:..| ||   |...:.|.
Zfish    78 HQW----DLPDWEGLQARYEHCSFTPESEPQSLWVFGGAEKSTNRNCVQAL-RFSDGGEGRRFWQ 137

  Fly   291 RACATGTPPAPR-YHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFQSAMWVEWKFSGR 354
            ....||.||:.| ||.::...|:.:|:|.|  |:  :.|:......|..:...|..|.:...:|.
Zfish   138 SVQVTGVPPSGRTYHTNSACVGNRLFVFSG--GE--AGSSAVTDAQLHVFDAVSVTWTQPDTTGT 198

  Fly   355 QPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENQWEEVDQLGDRPPTCCNFPVAVAR 419
            .|..|..|......:.::|:.|..|....:||:||| |...:|::|...||.||...........
Zfish   199 PPAQRHGHVITAVGSDIYIHGGMSGEKFHSDMFTLN-TESLKWQKVKAKGDLPPGVAAHSSVTFN 262

  Fly   420 DAMYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHTMV----------- 473
            ..:::|.|.:....|||:|:|....:.|..:..|..|      ||. |..|:|.           
Zfish   263 KNIFIFGGMTADGATNSMFKFQCDKQRWTLLKFEGDL------PPG-RLDHSMCLLPWRVKMEDS 320

  Fly   474 -HHD--RFLYVFGG 484
             |.|  ...:||||
Zfish   321 EHADVQHLCFVFGG 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 NanM 252..551 CDD:442289 69/257 (27%)
KELCH repeat 252..298 CDD:276965 15/54 (28%)
KELCH repeat 302..355 CDD:276965 13/53 (25%)
KELCH repeat 359..407 CDD:276965 15/47 (32%)
KELCH repeat 410..455 CDD:276965 9/44 (20%)
KELCH repeat 467..509 CDD:276965 9/32 (28%)
BTB1_POZ_LZTR1 551..704 CDD:349617
BACK1_LZTR1 708..766 CDD:350580
BTB2_POZ_LZTR1 781..906 CDD:349618
BACK2_LZTR1 902..962 CDD:350581
rabepkNP_001002209.1 NanM 39..276 CDD:442289 65/252 (26%)
Kelch 1 54..102 14/57 (25%)
Kelch 2 105..156 17/51 (33%)
KELCH repeat 149..199 CDD:276965 13/53 (25%)
Kelch 3 162..210 12/51 (24%)
KELCH repeat 203..250 CDD:276965 15/47 (32%)
Kelch 4 214..263 15/49 (31%)
KELCH repeat 253..293 CDD:276965 8/39 (21%)
Kelch_3 262..311 CDD:433188 15/55 (27%)
Kelch 5 264..313 15/55 (27%)
Kelch 6 328..351 4/7 (57%)
Blue background indicates that the domain is not in the aligned region.

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