DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and CG4069

DIOPT Version :9

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_648590.1 Gene:CG4069 / 39437 FlyBaseID:FBgn0036301 Length:509 Species:Drosophila melanogaster


Alignment Length:374 Identity:91/374 - (24%)
Similarity:144/374 - (38%) Gaps:80/374 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 TATHQWTRMLECAEFVGAKRSKHTVVAYKD---AMFVFGGDNGK------NMLNDLIRFGVKDKS 288
            |.|.:|.::...:.  ...||.|.:||...   .:::|||::..      :...||.:|.:|.:.
  Fly   107 TKTVEWRQLKSPSG--PTPRSGHQMVAVASNGGELWMFGGEHASPSQLQFHHYKDLWKFALKSRK 169

  Fly   289 WGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNK-NDLFEYKFQSAMWVEWKFS 352
            |.|..|. ..|:||..|...|:...:|||||:    |.|:...:. ||:..:..:|..|::.:..
  Fly   170 WERIAAP-NGPSPRSGHRMTVSKKRLFIFGGF----HDNNQSYHYFNDVHIFSLESYQWLKAEIG 229

  Fly   353 GR-QPVPRSAHG---AAVYDNKMWIYAGY---------DGNARLNDMWTL-------NLTGENQW 397
            |. .|.|||  |   ||..:.|::::.||         |......||:.|       :...:.:|
  Fly   230 GAIVPSPRS--GCCIAASPEGKIYVWGGYSRAAMKKEADRGVTHTDMFVLSQDKNAGDADNKYKW 292

  Fly   398 EEVDQLGDRPPTCCNFPVAVARDA-MYVFSGQSGL---------QITNSLFEFHFKTRTWR---- 448
            ..|...|.:|....:....||.:. .|.|.|...:         |..:.|..|...::|||    
  Fly   293 APVKPGGYKPKPRSSVGCTVAANGKAYTFGGVMDVDEDDEDVHGQFGDDLLAFDLTSQTWRLQEI 357

  Fly   449 ---------RISNE--PVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQ 502
                     :.|.|  .|...|...|.      |......|....||.:.||.|       ..|:
  Fly   358 QTKSSSAEKKDSEESKDVEMSAVDKPV------TTTTDGIFTVTVGGPSTSTTP-------FVSK 409

  Fly   503 VWSVIQPEQNSDVPSGRVFHASAVICDAMYIFGGTV---DNSVRRGDTY 548
            :.|:....:.::|||.|:.....|....:|||||..   |..:...|.|
  Fly   410 IPSLFAKPKPTNVPSPRMNPGMCVCKGTLYIFGGIFEEDDKQLTYNDFY 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 PLN02153 237..554 CDD:177814 89/370 (24%)
KELCH repeat 252..298 CDD:276965 15/54 (28%)
Kelch_3 261..310 CDD:290151 14/57 (25%)
Kelch_5 299..>329 CDD:290565 12/29 (41%)
KELCH repeat 302..355 CDD:276965 15/54 (28%)
Kelch_1 358..400 CDD:279660 14/60 (23%)
KELCH repeat 359..407 CDD:276965 15/66 (23%)
KELCH repeat 410..455 CDD:276965 13/69 (19%)
Kelch_1 410..452 CDD:279660 11/64 (17%)
Kelch_1 466..509 CDD:279660 9/42 (21%)
KELCH repeat 467..509 CDD:276965 9/41 (22%)
BTB 564..704 CDD:279045
BTB 575..707 CDD:197585
SPOP_C_like 707..766 CDD:269810
BTB 798..898 CDD:279045
BTB 802..902 CDD:197585
SPOP_C_like 902..960 CDD:269810
CG4069NP_648590.1 KELCH repeat 69..120 CDD:276965 3/12 (25%)
Kelch_3 80..132 CDD:290151 7/26 (27%)
KELCH repeat 124..179 CDD:276965 15/55 (27%)
Kelch_3 136..189 CDD:290151 14/53 (26%)
Kelch_3 191..244 CDD:290151 17/58 (29%)
Kelch_2 237..297 CDD:284956 14/61 (23%)
KELCH repeat 305..353 CDD:276965 9/47 (19%)
Kelch_5 423..463 CDD:290565 12/36 (33%)
KELCH repeat 426..470 CDD:276965 10/33 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446735
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
32.870

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