DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and CG6758

DIOPT Version :9

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_611647.1 Gene:CG6758 / 37532 FlyBaseID:FBgn0034704 Length:667 Species:Drosophila melanogaster


Alignment Length:260 Identity:70/260 - (26%)
Similarity:112/260 - (43%) Gaps:29/260 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 AKRSKHTVVAYKDAMFVFGGDNGKN-MLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSS 313
            |.|..|:.|...::|:||||.:..: ..|||.||.:....|.|..||||.|:|:...|.|...:.
  Fly   101 AGRFAHSAVRQDNSMYVFGGGSSSDTTFNDLWRFDLTHMRWARPVATGTYPSPKGSASMVAWRNQ 165

  Fly   314 MFIFGGYT-GDIH-SNSNLTNKNDLFEYKFQSAMWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAG 376
            :.:|||:. ..:| ........::|..|......|: .:.|...|.|.:.|.|.|:.::|.::.|
  Fly   166 LILFGGWRYPSLHPPYQPWCLFDELHYYDLGKNRWL-LRSSLSSPPPMAGHSATVHGDRMVVFGG 229

  Fly   377 Y----DGNARLNDMWTLNLTGENQWEEVDQLGDRP-PTCCNFPVAVARDAMYVFSGQSGLQITNS 436
            |    |.|...||.|.|:|..:..|:.:.....|| |......|.:.|:.:.:..|..|   .|.
  Fly   230 YQIKDDFNVNSNDTWVLDLPEQRWWQPLFVGNTRPSPRYGQIQVELGRNHLLIVGGCGG---ANR 291

  Fly   437 LFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHTMVHH--------DRFLYVFGGSADSTLPND 493
            ::     |..|.......|....:.|..::|:|  .||.        :.:|.|.|.|.:  :|.|
  Fly   292 VY-----TDAWLLDMTRDVWSWKSIAVRNKRFG--AVHMWCNPGCKVNNYLVVVGPSPN--MPQD 347

  Fly   494  493
              Fly   348  347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 PLN02153 237..554 CDD:177814 70/260 (27%)
KELCH repeat 252..298 CDD:276965 18/46 (39%)
Kelch_3 261..310 CDD:290151 20/49 (41%)
Kelch_5 299..>329 CDD:290565 8/31 (26%)
KELCH repeat 302..355 CDD:276965 10/54 (19%)
Kelch_1 358..400 CDD:279660 15/45 (33%)
KELCH repeat 359..407 CDD:276965 14/51 (27%)
KELCH repeat 410..455 CDD:276965 7/44 (16%)
Kelch_1 410..452 CDD:279660 7/41 (17%)
Kelch_1 466..509 CDD:279660 10/36 (28%)
KELCH repeat 467..509 CDD:276965 10/35 (29%)
BTB 564..704 CDD:279045
BTB 575..707 CDD:197585
SPOP_C_like 707..766 CDD:269810
BTB 798..898 CDD:279045
BTB 802..902 CDD:197585
SPOP_C_like 902..960 CDD:269810
CG6758NP_611647.1 F-box-like 24..>59 CDD:289689
KELCH repeat 103..148 CDD:276965 16/44 (36%)
Kelch_3 112..162 CDD:290151 20/49 (41%)
KELCH repeat 154..209 CDD:276965 10/55 (18%)
Kelch_5 209..249 CDD:290565 14/39 (36%)
KELCH repeat 212..257 CDD:276965 14/44 (32%)
KELCH repeat 267..314 CDD:276965 9/54 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446741
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
32.870

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