DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and Klhdc2

DIOPT Version :10

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001029305.1 Gene:Klhdc2 / 299113 RGDID:1306504 Length:406 Species:Rattus norvegicus


Alignment Length:308 Identity:76/308 - (24%)
Similarity:118/308 - (38%) Gaps:56/308 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 ACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTN--------KNDLFEYKFQSAMWVE 348
            ||     ||.|..|.||..|..||::|||      .||...        :.:|:.|..::..|.:
  Rat    27 AC-----PAERSGHVAVSDGRHMFVWGGY------KSNQVRGLYDFYLPREELWIYNMETGRWKK 80

  Fly   349 WKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGEN---QWEEVDQLGDRPPTC 410
            ....|..|...|...|...|..::::.|:......|..:.|:....:   |||.:|..|..|.:.
  Rat    81 INTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSADRVLQWERIDCQGIPPSSK 145

  Fly   411 CNFPVAVARDAMYVFSGQSGLQITNSLFEFHF-KTRTWRRISNEPVLRG---------------- 458
            ....|.|.::.:..|.|...|.....|..|.| :|..|.  |:.|  ||                
  Rat   146 DKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWN--SSHP--RGWNDHVHILDTETFAWS 206

  Fly   459 ---ATSAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVIQPEQNSDVPSGRV 520
               .|...||.|..|.........:||||.......||||..:||:..|:.:.|:  ...|.||.
  Rat   207 QPITTGKAPSPRAAHACATVGNKGFVFGGRYRDARMNDLHYLNLDTWEWNELIPQ--GICPVGRS 269

  Fly   521 FHA-SAVICDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKF 567
            :|: :.|..|.:::|||.........|.:.:       |..::::.:|
  Rat   270 WHSLTPVSSDHLFLFGGFTTEKQPLSDAWTY-------CISKNEWIQF 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 NanM 252..551 CDD:442289 74/290 (26%)
KELCH repeat 252..298 CDD:276965 2/5 (40%)
KELCH repeat 302..355 CDD:276965 16/60 (27%)
KELCH repeat 359..407 CDD:276965 11/50 (22%)
KELCH repeat 410..455 CDD:276965 11/45 (24%)
KELCH repeat 467..509 CDD:276965 13/41 (32%)
BTB1_POZ_LZTR1 551..704 CDD:349617 2/17 (12%)
BACK1_LZTR1 708..766 CDD:350580
BTB2_POZ_LZTR1 781..906 CDD:349618
BACK2_LZTR1 902..962 CDD:350581
Klhdc2NP_001029305.1 Kelch 1. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 31..85 15/59 (25%)
KELCH repeat 32..91 CDD:276965 17/64 (27%)
Kelch_4 32..89 CDD:433191 16/62 (26%)
NanM 78..341 CDD:442289 58/246 (24%)
KELCH repeat 92..138 CDD:276965 10/45 (22%)
Kelch 2. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 92..136 9/43 (21%)
Kelch 3. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 148..207 14/62 (23%)
KELCH repeat 218..265 CDD:276965 14/48 (29%)
Kelch 4. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 221..259 12/37 (32%)
Kelch 5. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 271..311 9/47 (19%)
Kelch 6. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 322..359
Blue background indicates that the domain is not in the aligned region.

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