DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and klhdc2

DIOPT Version :10

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001096337.1 Gene:klhdc2 / 100124923 XenbaseID:XB-GENE-1006177 Length:159 Species:Xenopus tropicalis


Alignment Length:119 Identity:34/119 - (28%)
Similarity:56/119 - (47%) Gaps:15/119 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 PAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTN-------KNDLFEYKFQSAMWVEWKFSGRQP 356
            ||.|..|.||..|.|:|::|||     .|:.:..       :::::.|..::..|...|..|..|
 Frog    32 PAERSGHVAVTDGQSIFVWGGY-----KNAPVRGFYDFYLPRDEIWIYDMENGSWQRVKTKGEIP 91

  Fly   357 VPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLT---GENQWEEVDQLGDRP 407
            :..|...||..|..::::.|:..:...|..:.|||.   |:..||:||..|..|
 Frog    92 LSMSGSCAACVDKVLYLFGGHHAHGNTNMFYMLNLNPRDGDLFWEKVDCKGIPP 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 NanM 252..551 CDD:442289 34/119 (29%)
KELCH repeat 252..298 CDD:276965
KELCH repeat 302..355 CDD:276965 15/59 (25%)
KELCH repeat 359..407 CDD:276965 15/50 (30%)
KELCH repeat 410..455 CDD:276965
KELCH repeat 467..509 CDD:276965
BTB1_POZ_LZTR1 551..704 CDD:349617
BACK1_LZTR1 708..766 CDD:350580
BTB2_POZ_LZTR1 781..906 CDD:349618
BACK2_LZTR1 902..962 CDD:350581
klhdc2NP_001096337.1 NanM <33..>125 CDD:442289 23/96 (24%)
KELCH repeat 35..91 CDD:276965 15/60 (25%)
Blue background indicates that the domain is not in the aligned region.

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