DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11664 and Sems

DIOPT Version :10

Sequence 1:NP_569865.1 Gene:CG11664 / 31033 FlyBaseID:FBgn0040341 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster


Alignment Length:231 Identity:69/231 - (29%)
Similarity:118/231 - (51%) Gaps:24/231 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GYVMQI-YGPQFLAAGSLFSARYVLTVAHCFKKNTKPEELSVRAGYRWIAWEFRGKQVAGLLRHP 98
            ||::.: |...|:..|:|.....|||.||||:...:.|..||..|...::.:...:||...::..
  Fly    57 GYLVAMRYFNNFICGGTLIHELIVLTAAHCFEDRAEKEAWSVDGGISRLSEKGIRRQVKRFIKSA 121

  Fly    99 KFSPLTLRNDIAVLRVKAAISHSHMINYIGLCSRPLTPLNMFAPPQELAGWNLM--------HIA 155
            :|..:|:..|:||:.:...:...: |..:.|||..|||    ....:::||.:.        |: 
  Fly   122 QFKMVTMNMDVAVVLLNRPMVGKN-IGTLSLCSTALTP----GQTMDVSGWGMTNPDDEGPGHM- 180

  Fly   156 QPLKSMSVQVEPEKNCRQWFPQ---ISGGVICASATMGEGLCYGDSGDPLISGGEVCGLAIAFRK 217
              |:::||.|..::.||:.:.:   ||..:.|||....:..|..|||.||:...:|||:......
  Fly   181 --LRTVSVPVIEKRICREAYRESVSISDSMFCASVLGKKDACTYDSGGPLVYEKQVCGIVSFGIG 243

  Fly   218 CGDKRYPALFTDVHYHRAFIAQAVLTLDREMLSKSR 253
            |..:|||.::|||||.:.||.:.:    :.:||:||
  Fly   244 CASRRYPGVYTDVHYVKPFIVKGI----KALLSRSR 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11664NP_569865.1 Tryp_SPc 38..239 CDD:473915 63/212 (30%)
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 63/213 (30%)

Return to query results.
Submit another query.