DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11664 and psh

DIOPT Version :10

Sequence 1:NP_569865.1 Gene:CG11664 / 31033 FlyBaseID:FBgn0040341 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:267 Identity:63/267 - (23%)
Similarity:96/267 - (35%) Gaps:84/267 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GIPVQQQNY------GYVMQIYGPQFLAAGSLFSARYVLTVAHCFKKNTKPEELSVRAG------ 78
            |.||....|      ||:  .:|..|...|||.::|:|||.|||...:...... ||.|      
  Fly   147 GYPVDPGVYPHMAAIGYI--TFGTDFRCGGSLIASRFVLTAAHCVNTDANTPAF-VRLGAVNIEN 208

  Fly    79 ----YRWIAWEFRGKQVAGLLRHPKFSPLTLRNDIAVLRVKAAISHSHMINYIGLCSRPLTPLNM 139
                |:.|.       :..:..||::.. ...||||:|.::..:..:..|       ||.. |:.
  Fly   209 PDHSYQDIV-------IRSVKIHPQYVG-NKYNDIAILELERDVVETDNI-------RPAC-LHT 257

  Fly   140 FA--PPQE----LAGWNLMHIAQPLKS-----MSVQVEPEKNCRQWFPQISGGV----------- 182
            .|  ||..    :|||.::::....:|     ..:::.|...|...:.:..|.:           
  Fly   258 DATDPPSNSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSL 322

  Fly   183 ICA-SATMGEGLCYGDSGDPL----------------ISGGEVCGLAIAFRKCGDKRYPALFTDV 230
            :|| ...:....|.||||.||                ||.|..|....          |.|:|.|
  Fly   323 LCAIDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVISSGFGCATVT----------PGLYTRV 377

  Fly   231 HYHRAFI 237
            ..:..||
  Fly   378 SSYLDFI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11664NP_569865.1 Tryp_SPc 38..239 CDD:473915 57/249 (23%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 63/267 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.