DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11664 and psh

DIOPT Version :9

Sequence 1:	NP_569865.1	Gene:	CG11664 / 31033	FlyBaseID:	FBgn0040341	Length:	254	Species:	Drosophila melanogaster
Sequence 2:	NP_573297.1	Gene:	psh / 32832	FlyBaseID:	FBgn0030926	Length:	394	Species:	Drosophila melanogaster

Alignment Length:	267	Identity:	63/267 - (23%)
Similarity:	96/267 - (35%)	Gaps:	84/267 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 GIPVQQQNY------GYVMQIYGPQFLAAGSLFSARYVLTVAHCFKKNTKPEELSVRAG------ 78
            |.||....|      ||:  .:|..|...|||.::|:|||.|||...:...... ||.|
  Fly   147 GYPVDPGVYPHMAAIGYI--TFGTDFRCGGSLIASRFVLTAAHCVNTDANTPAF-VRLGAVNIEN 208

  Fly    79 ----YRWIAWEFRGKQVAGLLRHPKFSPLTLRNDIAVLRVKAAISHSHMINYIGLCSRPLTPLNM 139
                |:.|.       :..:..||::.. ...||||:|.::..:..:..|       ||.. |:.
  Fly   209 PDHSYQDIV-------IRSVKIHPQYVG-NKYNDIAILELERDVVETDNI-------RPAC-LHT 257

  Fly   140 FA--PPQE----LAGWNLMHIAQPLKS-----MSVQVEPEKNCRQWFPQISGGV----------- 182
            .|  ||..    :|||.::::....:|     ..:::.|...|...:.:..|.:
  Fly   258 DATDPPSNSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSL 322

  Fly   183 ICA-SATMGEGLCYGDSGDPL----------------ISGGEVCGLAIAFRKCGDKRYPALFTDV 230
            :|| ...:....|.||||.||                ||.|..|....          |.|:|.|
  Fly   323 LCAIDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVISSGFGCATVT----------PGLYTRV 377

  Fly   231 HYHRAFI 237
            ..:..||
  Fly   378 SSYLDFI 384

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11664	NP_569865.1	Tryp_SPc	38..239	CDD:304450	57/249 (23%)
CG11664	NP_569865.1	Tryp_SPc	38..237	CDD:214473	55/247 (22%)
psh	NP_573297.1	CLIP	30..79	CDD:197829
		Tryp_SPc	143..384	CDD:214473	61/265 (23%)
		Tryp_SPc	144..387	CDD:238113	63/267 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24260
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100