DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec22 and SEC22

DIOPT Version :10

Sequence 1:NP_001259103.1 Gene:Sec22 / 31030 FlyBaseID:FBgn0260855 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_172653.1 Gene:SEC22 / 837737 AraportID:AT1G11890 Length:218 Species:Arabidopsis thaliana


Alignment Length:216 Identity:92/216 - (42%)
Similarity:129/216 - (59%) Gaps:7/216 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALLTMIARVIDGLPLVGTMQDDEQVPSGRSILDYQNQAKMLFRKL--GTHSPARCSIETGPYLF 63
            |..:|:||||.|||||...:.|...:|....   |:.|.|.||:.|  |.:..:|.|:|||||:|
plant     1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM---YKQQVKALFKNLSRGQNDASRMSVETGPYVF 62

  Fly    64 HYLIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANYGRRVNSVTRPYAFIEFDVYIQKAKKQL 128
            ||:||..||||.|.|:.|.|:|||.|||||..||....|..:.:..||||||:||.:|||.||..
plant    63 HYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFIQKTKKLY 127

  Fly   129 TDRR--RNISNINTQLQDVQRIMVQNIDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRKS 191
            .|.|  |||:.:|.:|.:|.:||.:|:.:||..|..|.::...:..|:..|:.|...||.|||::
plant   128 QDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQA 192

  Fly   192 MYVKAMALGMILLVFIMYFWV 212
            :..|...:.::..|..:.|||
plant   193 LIRKWAPVAIVFGVVFLLFWV 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec22NP_001259103.1 Longin 3..127 CDD:341428 62/125 (50%)
R-SNARE_SEC22 132..195 CDD:277219 22/64 (34%)
SEC22NP_172653.1 Longin 3..127 CDD:341428 63/126 (50%)
R-SNARE_SEC22 133..196 CDD:277219 21/62 (34%)

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