DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec22 and sec22c

DIOPT Version :10

Sequence 1:NP_001259103.1 Gene:Sec22 / 31030 FlyBaseID:FBgn0260855 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_707343.1 Gene:sec22c / 558856 ZFINID:ZDB-GENE-060227-2 Length:303 Species:Danio rerio


Alignment Length:187 Identity:49/187 - (26%)
Similarity:81/187 - (43%) Gaps:17/187 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALLTMIARVIDGLPLVGTMQDDEQVPSGRSILDYQNQAKMLFRKLGTHSPARCSIETGPYLFHY 65
            :.|...:.||.|||||..:    ......:.:.:.:.|.|::.:.|.. .|.|.:::......|:
Zfish     3 LILFAFVVRVRDGLPLSAS----TDFLHNKELQEKKQQIKIISKSLNV-LPERGTVKGHELNIHF 62

  Fly    66 LIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANY-GRRVNSVTRPYAFIEFDVYIQKAKKQLT 129
            |....|.|:.:.........||.:||||..||.|.: ...|....|||.|:|||..|||.::.. 
Zfish    63 LSCEGVSYMSVCACTLPAATAFCFLEDLRWEFTACFDNSAVAMANRPYPFLEFDSAIQKLQQHY- 126

  Fly   130 DRRRNISNINTQLQDVQRIM------VQNIDD-VLQRGTVLAELDTKTQNLSMMSQK 179
             .::...::...|.:||..:      |..::| ||..|.....::..|  .|..||:
Zfish   127 -NQKGGPSLEVTLAEVQEDLRSSPPQVLTMEDVVLSNGAANGHVEQTT--ASGQSQR 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec22NP_001259103.1 Longin 3..127 CDD:341428 37/124 (30%)
R-SNARE_SEC22 132..195 CDD:277219 12/55 (22%)
sec22cXP_707343.1 Longin 5..126 CDD:341428 37/125 (30%)

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