DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec22 and sec22b

DIOPT Version :9

Sequence 1:NP_001259103.1 Gene:Sec22 / 31030 FlyBaseID:FBgn0260855 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_989156.1 Gene:sec22b / 394761 XenbaseID:XB-GENE-999421 Length:215 Species:Xenopus tropicalis


Alignment Length:217 Identity:123/217 - (56%)
Similarity:159/217 - (73%) Gaps:7/217 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALLTMIARVIDGLPLVGTMQDDEQVPSGRSILDYQNQAKMLFRKLGTHSPARCSIETGPYLFHY 65
            |.||||||||.|||||..:||:|||  |||.:..||||||.|||||...||.||::|.|...|||
 Frog     1 MVLLTMIARVADGLPLAASMQEDEQ--SGRDLQQYQNQAKQLFRKLNEQSPTRCTLEAGAMTFHY 63

  Fly    66 LIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANYGRRVNSVTRPYAFIEFDVYIQKAKKQLTD 130
            |||..|||||:.:..:.|:|||.|||||..||...:|::|.:|:|||:|||||.||||.||...|
 Frog    64 LIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRPYSFIEFDNYIQKTKKSYID 128

  Fly   131 --RRRNISNINTQLQDVQRIMVQNIDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRKSMY 193
              .|||:|::||:|||||||||.||::||.||..|:.||:|..|||.:|:||::|||.||.:|.|
 Frog   129 SRARRNLSSVNTELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLSKKYRQDAKYLNMRSTY 193

  Fly   194 VKAMAL---GMILLVFIMYFWV 212
            .|..|:   .::|:|:|.::|:
 Frog   194 AKLAAVAVFSVMLIVYIRFWWL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec22NP_001259103.1 SNC1 10..192 CDD:227472 107/183 (58%)
Longin 39..105 CDD:290490 36/65 (55%)
R-SNARE_SEC22 132..195 CDD:277219 38/62 (61%)
sec22bNP_989156.1 Longin 3..126 CDD:341428 77/124 (62%)
R-SNARE_SEC22 132..195 CDD:277219 38/62 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 101 1.000 Domainoid score I6869
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3597
Inparanoid 1 1.050 242 1.000 Inparanoid score I3243
OMA 1 1.010 - - QHG53513
OrthoDB 1 1.010 - - D569556at33208
OrthoFinder 1 1.000 - - FOG0004133
OrthoInspector 1 1.000 - - oto102577
Panther 1 1.100 - - LDO PTHR45837
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6269
SonicParanoid 1 1.000 - - X3400
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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