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Protein Alignment Sec22 and Vamp2
DIOPT Version :9
Sequence 1: | NP_001259103.1 |
Gene: | Sec22 / 31030 |
FlyBaseID: | FBgn0260855 |
Length: | 213 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006246655.1 |
Gene: | Vamp2 / 24803 |
RGDID: | 3949 |
Length: | 135 |
Species: | Rattus norvegicus |
Alignment Length: | 90 |
Identity: | 30/90 - (33%) |
Similarity: | 47/90 - (52%) |
Gaps: | 7/90 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 128 LTDRRRNISNINTQLQDVQRIMVQNIDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRKSM 192
||..|| :.....|:.:|..||..|:|.||:|...|:|||.:...|...:.:::..|..|.||..
Rat 26 LTSNRR-LQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYW 89
Fly 193 Y--VKAM-ALGM---ILLVFIMYFW 211
: :|.| .||: |:|:.|:..|
Rat 90 WKNLKMMIILGVICAIILIIIIGEW 114
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5143 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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