DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec22 and Sec22c

DIOPT Version :10

Sequence 1:NP_001259103.1 Gene:Sec22 / 31030 FlyBaseID:FBgn0260855 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_848792.2 Gene:Sec22c / 215474 MGIID:2447871 Length:303 Species:Mus musculus


Alignment Length:208 Identity:61/208 - (29%)
Similarity:94/208 - (45%) Gaps:20/208 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALLTMIARVIDGLPLVGTMQDDEQVPSGRSILDYQNQAKMLFRKLGTHSPARCSIETGPYLFHY 65
            |.|...|.||.|||||..:    ......:..|:.:.|.|.|.::|..| |.|...|:..:|.::
Mouse     3 MILFASIVRVRDGLPLSAS----TDFYYAQEFLECRRQLKTLAQRLARH-PGRGCAESCDFLIYF 62

  Fly    66 LIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANYGRR-VNSVTRPYAFIEFDVYIQKAKKQLT 129
            ....||..:.:..:.....:||.:||.|..:|.|:|... |...:|||||:|||..|||.|... 
Mouse    63 SSSGDVACMAICSRQCPAAMAFCFLEALWWDFIASYDTTCVGLASRPYAFLEFDSVIQKTKWHF- 126

  Fly   130 DRRRNISNINTQLQDVQRIMVQNIDDVLQRGTVLAELDTKTQN--LSMMSQKYKKDAKLLNRKSM 192
             ...:.|.:.:.|:.:|..:      ..|...||:..||...|  |:..:..:.:.|..|..|.:
Mouse   127 -NHMSSSQMKSGLEKIQEEL------EFQPPAVLSLEDTDVANGMLNGHTPVHSEPAPNLRMKPV 184

  Fly   193 YVKAMALGMILLV 205
                .|||::.||
Mouse   185 ----TALGVLSLV 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec22NP_001259103.1 Longin 3..127 CDD:341428 42/124 (34%)
R-SNARE_SEC22 132..195 CDD:277219 13/64 (20%)
Sec22cNP_848792.2 Longin 5..123 CDD:341428 41/122 (34%)

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