DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec22 and sec22ba

DIOPT Version :10

Sequence 1:NP_001259103.1 Gene:Sec22 / 31030 FlyBaseID:FBgn0260855 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_998549.1 Gene:sec22ba / 114464 ZFINID:ZDB-GENE-010724-3 Length:215 Species:Danio rerio


Alignment Length:217 Identity:120/217 - (55%)
Similarity:149/217 - (68%) Gaps:6/217 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALLTMIARVIDGLPLVGTMQDDEQVPSGRSILDYQNQAKMLFRKLGTHSPARCSIETGPYLFHY 65
            |.|.|||.||.|.|||..:||:|||  |||.:..||:|||.|.|||...|||||::|.|...|||
Zfish     1 MVLQTMIVRVADSLPLAASMQEDEQ--SGRDLQKYQSQAKQLCRKLNEQSPARCTLEAGKMCFHY 63

  Fly    66 LIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANYGRRVNSVTRPYAFIEFDVYIQKAKKQLTD 130
            :||..||||.:.:..:.|:|||.|||||..||...||.:|.||:|||:|||||.||||..|...|
Zfish    64 VIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFSEQYGAKVPSVSRPYSFIEFDTYIQKTIKSYID 128

  Fly   131 --RRRNISNINTQLQDVQRIMVQNIDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRKSMY 193
              .|||:.|||::|.|||||||.||::|||||..|:.||:|..|||.:|:||:.|||.||.:|.|
Zfish   129 SRARRNLGNINSELHDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTRSTY 193

  Fly   194 VKAMALGMILLVFIMY--FWVL 213
            .|..|..:|::..|:|  ||.|
Zfish   194 AKVAAGAVIIITLIIYVRFWWL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec22NP_001259103.1 Longin 3..127 CDD:341428 71/123 (58%)
R-SNARE_SEC22 132..195 CDD:277219 38/62 (61%)
sec22baNP_998549.1 Longin 5..126 CDD:341428 71/122 (58%)
R-SNARE_SEC22 132..195 CDD:277219 38/62 (61%)

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