DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rbf and RBL2

DIOPT Version :9

Sequence 1:NP_525036.2 Gene:Rbf / 31027 FlyBaseID:FBgn0015799 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001310537.1 Gene:RBL2 / 5934 HGNCID:9894 Length:1139 Species:Homo sapiens


Alignment Length:1162 Identity:291/1162 - (25%)
Similarity:459/1162 - (39%) Gaps:379/1162 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SEPDPQELGAEVVSGLVATSDDRLE-----------MINAEYTNLCRDLNMDRQTELQGYETYLE 55
            |.|.|....|...|......|...|           .|...:..||..||||.....:.:::|..
Human     8 SPPPPPPPPAAAASDEEEEDDGEAEDAAPPAESPTPQIQQRFDELCSRLNMDEAARAEAWDSYRS 72

  Fly    56 VSQRCSMEGTASHWMCCAIYTACRRTSTPTVTGQNAVVKGNCVSLNNLLRCCKMSIYEFKTKIKQ 120
            :|:..::||...||:.||:|.|||: |.|||:  ...|:||.|||..:|:|.:.|:.||..|:|:
Human    73 MSESYTLEGNDLHWLACALYVACRK-SVPTVS--KGTVEGNYVSLTRILKCSEQSLIEFFNKMKK 134

  Fly   121 WCDMANLPQEFVNEIEDLDRKFSITFMLHKRFRIIMDMIFSCPPNEKKHSKYISLHGNHAHGK-C 184
            |.||||||..|....|.|:|.|:::.::.|::..|...||..|..|:...:    .|.....: |
Human   135 WEDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQ----RGRKQRRQPC 195

  Fly   185 SYIKLDDICWRLFLCAKNQKPSNTVDLVTSYNLMICCIDLIYNNVL-AEKRTDLINPKFEGLPSN 248
            :..::...||.||:.||...|..:.|||.||:|::|.:||:|.|.| ...|.:|:||.|:||..:
Human   196 TVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSED 260

  Fly   249 WTELDFR--HNPHCILSNFCDMTE----EAKAMKATTFRQIMSSFFQASTIYGNKDTMLGLLANE 307
            :...|.:  .:|.||:...|.:.:    |||.:|...::..:...::...:.|.::.:.|.|...
Human   261 FHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKEENLTGFLEPG 325

  Fly   308 NFERNLKSLNISYEQYVLSVGEFDERILSAYDAGEH-----TALN-------------------- 347
            ||..:.|::|.:||:||||||..||||....||.|.     ..||                    
Human   326 NFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCLNAGSGTETAERVQMKNILQQH 390

  Fly   348 ---DQSLRPPVTPLTR----KQDLPAQPAMAGDKFEPVRNATNNVKQLSAF--GRITEPTDFVKQ 403
               .::||.. ||||.    |::.|.        ..||..||:::.:|...  |....|::.::|
Human   391 FDKSKALRIS-TPLTGVRYIKENSPC--------VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQ 446

  Fly   404 --------AGEEVIAKLLSIIEEIEQKFLAKYPSTE--------AKSRFQLAKSFFFYLLDQILQ 452
                    ..:.:..:|..:.|...|.|   .|..:        |...|:.|:..::.:|:.:::
Human   447 ILRTCSRDPTQAIANRLKEMFEIYSQHF---QPDEDFSNCAKEIASKHFRFAEMLYYKVLESVIE 508

  Fly   453 AEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEAYKTELKFPWVLDCFSISAFEFQKIIE 517
            .|.:...|:||..:|.|..    |:.:|:|||:|:|..:||....||::.:.|.:..:.|.|:||
Human   509 QEQKRLGDMDLSGILEQDA----FHRSLLACCLEVVTFSYKPPGNFPFITEIFDVPLYHFYKVIE 569

  Fly   518 IVVRHGSHEGCLNRSLIKHLNSIEETCLERLAWARNSTVWEMIASAQLPLPTWLMV----NLDRA 578
            :.:|  :.:| |.|.::||||.|||..|:.|||...|.:||.|...:..:||...|    ||:||
Human   570 VFIR--AEDG-LCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEEVMPPQNLERA 631

  Fly   579 -----AG---------------------------------------------------------- 580
                 ||                                                          
Human   632 DEICIAGSPLTPRRVTEVRADTGGLGRSITSPTTLYDRYSSPPASTTRRRLFVENDSPSDGGTPG 696

  Fly   581 ----------------------------------------------------------------P 581
                                                                            |
Human   697 RMPPQPLVNAVPVQNVSGETVSVTPVPGQTLVTMATATVTANNGQTVTIPVQGIANENGGITFFP 761

  Fly   582 LQI-------------------------------------------------------------- 584
            :|:                                                              
Human   762 VQVNVGGQAQAVTGSIQPLSAQALAGSLSSQQVTGTTLQVPGQVAIQQISPGGQQQKQGQSVTSS 826

  Fly   585 ------------FLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETELMKDRHLDQN 637
                        |.||||.|..:|::.||::|.:.::..:.||..||.||....|||.||||||.
Human   827 SNRPRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQL 891

  Fly   638 IMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFI----------------------D 680
            :|||||:..:|.: ||..|.:|||.||.||||.:.|||.|.|                      :
Human   892 LMCAIYVMAKVTK-EDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTE 955

  Fly   681 INE-----DGEPKVK---------------------------------DIIHFYNHTYVPLMRQF 707
            :|:     |..|.::                                 |:|.|||:.|:..::.|
Human   956 LNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIYIKQIKTF 1020

  Fly   708 VIDYLNVTPDVSGRASDLQLSPHPKERAAQPKKV--TQSHSLFVSQMSKNEIQQSPNQMV-YSFC 769
            .:.|.....|..      .|||:|..|...|:::  :|:|.:::|. .|||...||.:.: |.|.
Human  1021 AMKYSQANMDAP------PLSPYPFVRTGSPRRIQLSQNHPVYISP-HKNETMLSPREKIFYYFS 1078

  Fly   770 RSPAKDLQAMNEKVRGG-----KR--MLSFGDE-PGLGTMAETKRSKISQVKAVMDD 818
            .||:|.|:.:|..:|.|     ||  :|..|.| |......|...:.:.:::.|.:|
Human  1079 NSPSKRLREINSMIRTGETPTKKRGILLEDGSESPAKRICPENHSALLRRLQDVAND 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RbfNP_525036.2 DUF3452 90..225 CDD:288762 48/135 (36%)
RB_A 376..560 CDD:280101 57/201 (28%)
RB_B 582..704 CDD:280100 58/255 (23%)
RBL2NP_001310537.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45 7/36 (19%)
DUF3452 104..236 CDD:288762 48/135 (36%)
Pocket, binds E1A 417..1024 127/617 (21%)
Domain A 417..616 58/208 (28%)
RB_A 417..609 CDD:280101 57/201 (28%)
Spacer 617..827 11/209 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 654..678 0/23 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 810..832 0/21 (0%)
Domain B 828..1024 58/196 (30%)
RB_B 835..1017 CDD:280100 57/182 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 933..999 3/65 (5%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147370
Domainoid 1 1.000 111 1.000 Domainoid score I6234
eggNOG 1 0.900 - - E1_KOG1010
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4098
Inparanoid 1 1.050 449 1.000 Inparanoid score I1622
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46367
OrthoDB 1 1.010 - - D113612at2759
OrthoFinder 1 1.000 - - FOG0002362
OrthoInspector 1 1.000 - - otm40415
orthoMCL 1 0.900 - - OOG6_103769
Panther 1 1.100 - - LDO PTHR13742
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3203
SonicParanoid 1 1.000 - - X2053
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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