DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbf and LOC1277084

DIOPT Version :10

Sequence 1:NP_525036.2 Gene:Rbf / 31027 FlyBaseID:FBgn0015799 Length:845 Species:Drosophila melanogaster
Sequence 2:XP_061498761.1 Gene:LOC1277084 / 1277084 VectorBaseID:AGAMI1_012071 Length:1060 Species:Anopheles gambiae


Alignment Length:1084 Identity:265/1084 - (24%)
Similarity:422/1084 - (38%) Gaps:310/1084 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SDDRLEMINAEYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCAIYTACRRTSTPT 85
            |:|..: :...:..:||.||:|..||.:.:.::.....:..:.|..:||||||:|.||.: ..|.
Mosquito     3 SNDNSD-LRETHRKICRALNIDADTENRSWSSFERTRDQFDLTGEPTHWMCCALYVACLQ-ELPA 65

  Fly    86 VTGQNAVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFVNEIEDLDRKFSITFMLHK 150
            |...:..::||.|::.|||..|.:.|.||.:|:|||.::.:||......:::|..:||::...:.
Mosquito    66 VGDPDHYIQGNGVNITNLLTQCDIKIQEFFSKMKQWSEIRSLPGRLRTAVDNLHHEFSVSITTYT 130

  Fly   151 RFRIIMDMIF---SCPPNEKKHSKYISLHGNHAHGKCSYIKLDDICWRLFLCAKNQKPSNTVDLV 212
            .|......||   :..|:|.|.:|      ......|||.:|.:..|.|||..|.|......||.
Mosquito   131 VFGEDFPRIFNEANIVPDEPKRNK------KSKPNPCSYNRLREFSWLLFLTVKEQHREQRRDLA 189

  Fly   213 TSYNLMICCIDLIYNNVLAEKRTDLINPKF--EGLPSN------WTELDFRHNPHCILSN-FCDM 268
            |:.:|.:|.:||||.||:|:.|.||:|||.  ||..|:      ..|...:.|....|.| :...
Mosquito   190 TAMDLCVCVMDLIYRNVVADGRMDLVNPKVLQEGGSSSVDGTTAAAEAALKINVREQLCNEYPTT 254

  Fly   269 TEEAKAMKATTFRQIMSSFFQASTIYGNKD--TMLGLLANENFERNLKSLNISYEQYVLSVGEFD 331
            :|.......:.|...:||..:|:.:.|..|  :.|||::..|||.|||.||..||:.:|..|..|
Mosquito   255 SESVDETNRSVFLPALSSMVEANDLRGTPDGQSFLGLVSVANFEDNLKLLNRRYERCILRCGMLD 319

  Fly   332 ERILSAYDAGEHTALNDQSLR---PPVTPLTRKQDL---------------------PAQPAMAG 372
            |||..:......:..|..|:.   ||.|||:.|...                     |.|  .:|
Mosquito   320 ERIALSSRTSPTSQRNRWSVNVAGPPRTPLSLKSGRTGGGGGVGMVRGIRVGFANGGPEQ--SSG 382

  Fly   373 DKFEPVRNATNNVKQLSAFGRITEP-------TDFVKQAGEEVIAKLLSIIEEIEQKFLAKYPST 430
            ..| .||   ..:.||....|..||       ...:|......:..:|..::.:..:|:.:....
Mosquito   383 SPF-VVR---GTLSQLMKRIRGHEPGSPRGTFLTLMKNCTPSPLGTVLEHVDRMRARFVKRLTEQ 443

  Fly   431 E------AKSRFQLAKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVL 489
            |      |..||...::.::.||:.|:..|::.:|.:.:.|::....|...||.|::.|..|::.
Mosquito   444 EGWKLALADCRFDAVEALYYQLLENIIPWELKKRPSMTVSRVIYDLCSNAFFNETVIVCAAEIIF 508

  Fly   490 EAYKTELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAWARNS 554
            ...:.:..|||:|:.|.:..|.|..|||:.|.  ::...|...::.||..|||..::.::|..:|
Mosquito   509 FLRQEQHNFPWILEVFGMEPFRFFHIIEVTVT--ANNDILTSDIVNHLRRIEEQLVDSISWKSSS 571

  Fly   555 TVWEMIASAQLPLPTWLMVNLD-------------------------RAAGP------------- 581
            .:||.:......:|    .|.|                         |..||             
Mosquito   572 VLWECMEKENYQIP----ANKDVEQRAEIAGVTPLKGDSVPNTPNGTRGGGPSTSTATTAATTTT 632

  Fly   582 ----------------------------------------------------------------- 581
                                                                             
Mosquito   633 ATTATGRPVPHPDSAKKKLFVDLPATPTKLLPPPAASTSSATPSAATATSTSAGITGTTAAGSAS 697

  Fly   582 --------------------------------------------LQIFLRKVYLLGWLRIQKLCS 602
                                                        |..|.||:|.:.:.|:..||.
Mosquito   698 SSEMANVPGNGTNGSSDSKSISSFSSPQRSAHDPQHPPSNETRRLNFFFRKMYQVAYDRLCNLCQ 762

  Fly   603 ELSL-CEKTPESIWHIFEHSITH-ETELMKDRHLDQNIMCAIYIYIRVKRMEDPKFSDIMRAYRN 665
            .|.: .|...:.||.|.|.:||. ..|||:||||||.:||||::.:|:|::.: .|..||..|.:
Mosquito   763 NLGIDSEVIQKLIWTILEFTITKCSQELMRDRHLDQLLMCAIFVTMRIKKLPN-TFKQIMHCYHS 826

  Fly   666 QPQAVNSVYREVFI--------------DINED-------------------------------- 684
            ||||.:|:||.|||              ::.|:                                
Mosquito   827 QPQANSSIYRSVFIRYESAAAPPDASGKEVEEEAKDADECSNGQGKNGTTTTTTATASSNGEATG 891

  Fly   685 ------------------GEPKVKDIIHFYNHTYVPLMRQFVIDYLNVTPDVSGRASDLQLSPHP 731
                              |.....|||.|||..||..:..|.:.|.|.  |||  ...|.|||.|
Mosquito   892 DASERCPVTEMAGTSVQYGREVYGDIIKFYNDIYVVTVHHFALQYYNA--DVS--QESLFLSPTP 952

  Fly   732 KER----AAQPKKVTQSHSLFVSQMSK-NEIQQSPNQMVYSFCRSPAKDLQAMNEK-----VRG- 785
            |.:    ...|::::...:|:||..:| :.::.|||..|.:|..||.:. ..|:|:     ||| 
Mosquito   953 KSQMRNIQKSPRQISSGINLYVSTTNKISSLKDSPNVRVLTFPSSPGQS-PTMHERKLPLLVRGK 1016

  Fly   786 ----GKRMLSFGDEPGLGTMAETKRSKISQVKAVMDDPELQSAE 825
                ..|.|:   ||  .....|:.:|:.::..:..:.:.|..|
Mosquito  1017 VGETAARRLT---EP--AAYEPTRATKLRRLDKIHQERQHQDNE 1055

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RbfNP_525036.2 DUF3452 90..228 CDD:463402 45/140 (32%)
RB_A 377..560 CDD:460364 47/195 (24%)
RB_B 582..705 CDD:460363 55/188 (29%)
LOC1277084XP_061498761.1 None

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