DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbf and rb1

DIOPT Version :9

Sequence 1:NP_525036.2 Gene:Rbf / 31027 FlyBaseID:FBgn0015799 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001269454.1 Gene:rb1 / 100493114 XenbaseID:XB-GENE-1018165 Length:900 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RbfNP_525036.2 DUF3452 90..225 CDD:288762
RB_A 376..560 CDD:280101
RB_B 582..704 CDD:280100
rb1NP_001269454.1 DUF3452 99..200 CDD:371807
RB_A 349..550 CDD:366846
RB_B 620..739 CDD:366845
Rb_C 742..896 CDD:370194
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I6700
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113612at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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