DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbf and rbl1

DIOPT Version :9

Sequence 1:NP_525036.2 Gene:Rbf / 31027 FlyBaseID:FBgn0015799 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001135587.1 Gene:rbl1 / 100216140 XenbaseID:XB-GENE-976494 Length:1048 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RbfNP_525036.2 DUF3452 90..225 CDD:288762
RB_A 376..560 CDD:280101
RB_B 582..704 CDD:280100
rbl1NP_001135587.1 DUF3452 82..214 CDD:288762
RB_A 386..576 CDD:280101
RB_B 768..924 CDD:280100
Rb_C 929..>1026 CDD:286075
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I6700
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 413 1.000 Inparanoid score I1805
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113612at2759
OrthoFinder 1 1.000 - - FOG0002362
OrthoInspector 1 1.000 - - otm47588
Panther 1 1.100 - - O PTHR13742
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2053
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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