Protein Alignment CG13360 and nhr-246

DIOPT Version :10

• Sequence 1: NP_569859.1
• Gene: CG13360 / 31025
• FlyBaseID: FBgn0025620
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001256661.1
• Gene: nhr-246 / 191499
• WormBaseID: WBGene00014192
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 263
• Identity: 65/263 - (24%)
• Similarity: 101/263 - (38%)
• Gaps: 76/263 - (28%)

  Fly   120 SKFGAKCLYTTREPIQTIVFDDLTQYGYKLASRQSGLNEEHCVVILKKLGKFHASSMVLAEKEPS 184
            ||.|.|.      |:..||.:.|..  .||.....|.||:....|:.:|.|.|..|:. .||...
 Worm   124 SKAGEKA------PVPVIVLEMLED--CKLHDLIPGFNEDQLFKIVDELVKLHIFSLT-TEKWKE 179

  Fly   185 VREHFTTGMLDENYIRTNERFINFMTLQC------RTLA-------------NVVSKWPGYELLA 230
            :       :.||:.:..:    .|  |||      |.||             |.:...|.|
 Worm   180 I-------VPDESKLAMS----GF--LQCMVADVGRKLAQNPELGVILSYVENTLDTDPNY---- 227

  Fly   231 EKLHRHCDNIKENLVTTGRPLPGEITVLNHGDLWVNNFMYKYDDEQPTKPIDAIFVDFQNSFFGS 295
                  ...:::..:...||     :|:.|||||....::..:|.      .|..||:|.:..||
 Worm   228 ------LQKMRDEYINEERP-----SVICHGDLWAPQILWDKEDN------IAGIVDWQATHRGS 275

  Fly   296 PGCDINFFLN--SSVQLDVLIHRREF---LIQTYYASLRDSLERMHSAFVPSYADIQQEIRAREL 355
            |..|::..|:  :|||     :|:.|   |:..||..|:..|:  ...|..::.  ::||.....
 Worm   276 PMEDLHHILSTCTSVQ-----NRKTFTKPLLDHYYNKLKVGLK--EKGFKTTWT--REEIDIEYN 331

  Fly   356 YGF 358
            |.|
 Worm   332 YSF 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG13360	NP_569859.1	EcKL	50..335	CDD:397213	60/238 (25%)
nhr-246	NP_001256661.1	CHK	134..314	CDD:214734	55/223 (25%)