DRSC/TRiP Functional Genomics Resources

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Protein Alignment tw and PMT4

DIOPT Version :10

Sequence 1:NP_569858.1 Gene:tw / 31024 FlyBaseID:FBgn0086368 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_012677.1 Gene:PMT4 / 853608 SGDID:S000003904 Length:762 Species:Saccharomyces cerevisiae


Alignment Length:825 Identity:239/825 - (28%)
Similarity:369/825 - (44%) Gaps:175/825 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VKTPKCPRRG----SVKDV-------AQNAPR---------TAPTSSKEANWNWWLLLATVFLVT 50
            :..||....|    |.|||       .:.||:         ..|....|:.:::|:.:.|  |:.
Yeast     1 MSVPKKRNHGKLPPSTKDVDDPSLKYTKAAPKCEQVAEHWLLQPLPEPESRYSFWVTIVT--LLA 63

  Fly    51 FATRFYKVTEPDHICWDETHFGKMGSWYINRTFFFDVHPPLGKMLIGLSGYLTGYNGTFPFEKPG 115
            ||.||||:..|..:.:||.||||..|:|:.|::|||||||..||:|...|:|.||:|:|.|::.|
Yeast    64 FAARFYKIWYPKEVVFDEVHFGKFASYYLERSYFFDVHPPFAKMMIAFIGWLCGYDGSFKFDEIG 128

  Fly   116 DKYNETR---YQGMRYFCTTLGALIMPMGFDTVYDLTRSHEAALLAAAYLIFDVGLLTLNQYILL 177
            ..| ||.   |...|.|...||.|.:|:.|:|:.:|.........|:..:..|...:|..:.|||
Yeast   129 YSY-ETHPAPYIAYRSFNAILGTLTVPIMFNTLKELNFRAITCAFASLLVAIDTAHVTETRLILL 192

  Fly   178 DPILLFFMMASVWGMVKVSKSTASGGSYGLR------WWLWLFLTGTMLSCTISVKFVGLFVVLL 236
            |.||:..:.|:::..|:..|..       ||      |::||..||..||..||.|:||:.....
Yeast   193 DAILIISIAATMYCYVRFYKCQ-------LRQPFTWSWYIWLHATGLSLSFVISTKYVGVMTYSA 250

  Fly   237 VGLHTATELWLILGDL--GQPILETVKQLACRAITLIVWPVLLYILFFYIHLSVLNRSGNGDGFY 299
            :|......||.:| |:  |..:.:.::..:.|...|::.|.::|:.:|::|.:|||.||.||.|.
Yeast   251 IGFAAVVNLWQLL-DIKAGLSLRQFMRHFSKRLNGLVLIPFVIYLFWFWVHFTVLNTSGPGDAFM 314

  Fly   300 SSAFQSRLIGNSLYNASMPRDVAYGSLVTIKNHKTGGGYLHSHHHLYPK--------GSGARQQQ 356
            |:.||..|..:.|...|  :.|.|..::||| |:....:||||...||:        .:|   ||
Yeast   315 SAEFQETLKDSPLSVDS--KTVNYFDIITIK-HQDTDAFLHSHLARYPQRYEDGRISSAG---QQ 373

  Fly   357 VTTYTHKDENNKW-LIRPHNKPGPPKGKVQILRHGDLVRLTHMATRRNLHSHNEPAPMTKKHLQV 420
            ||.|||.|.||:| ::.||   |...||.|.:.....:||.|:||...|.:|:..:|....:.::
Yeast   374 VTGYTHPDFNNQWEVLPPH---GSDVGKGQAVLLNQHIRLRHVATDTYLLAHDVASPFYPTNEEI 435

  Fly   421 T------GYGELGLGDANDVWRVLIVGGKVNETVHTVTSR---LKFIHLLQNCAL-TSSGKQLPK 475
            |      |.||| ..:....::.|    |.::..|.:.|:   .:..|:..:.|| |.:.:.||.
Yeast   436 TTVTLEEGDGEL-YPETLFAFQPL----KKSDEGHVLKSKTVSFRLFHVDTSVALWTHNDELLPD 495

  Fly   476 WGFEQQEVSCNPNVRDKNSQWNVE-----DNEHKLMPSVSFSVYAP------GFFARFLESHAVM 529
            |||:|||::.|..|.|.::.|.|:     |...|        ||.|      .|..:::|:...|
Yeast   496 WGFQQQEINGNKKVIDPSNNWVVDEIVNLDEVRK--------VYIPKVVKPLPFLKKWIETQKSM 552

  Fly   530 LQGNAGLKPKEGEVTSRPWQWPINYRGQFF---SGSSYRIYLLGNPLIWWSNLVFLALFVTVFLC 591
            .:.|..|. .|....|.|:.||.:..|..|   .....:||.:||.:.||..::.||:||.:.:.
Yeast   553 FEHNNKLS-SEHPFASEPYSWPGSLSGVSFWTNGDEKKQIYFIGNIIGWWFQVISLAVFVGIIVA 616

  Fly   592 NAVVQQRRAGFARSAAQNQAQVPDSETVAQDEESEHSTTDICSCCTPAKEIVPKAVPSGSPEAPN 656
            :.:.:.|  |:   .|.|:                         .|..|...|            
Yeast   617 DLITRHR--GY---YALNK-------------------------MTREKLYGP------------ 639

  Fly   657 PAQSLRAAAWLFLGWMLHYLPFWAMGRVLYFHHYFPALIFNSLLTGVMYNYI------------- 708
                   ..:.|:.|..||.||:.|.|..:.|||.||.:...|.:|.::..|             
Yeast   640 -------LMFFFVSWCCHYFPFFLMARQKFLHHYLPAHLIACLFSGALWEVIFSDCKSLDLEKDE 697

  Fly   709 ------------LRVLPKWIHHVILGLVLSILVYSFAAFSPLAYG 741
                        :.|.|   :.|.|..|...:.:.|..||||.||
Yeast   698 DISGASYERNPKVYVKP---YTVFLVCVSCAVAWFFVYFSPLVYG 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twNP_569858.1 PMT 44..290 CDD:396786 88/256 (34%)
beta-trefoil_MIR_POMT2 321..503 CDD:467753 65/205 (32%)
PMT_4TMC 520..761 CDD:465056 56/250 (22%)
PMT4NP_012677.1 PMT 58..305 CDD:396786 88/257 (34%)
beta-trefoil_MIR_PMT4-like 334..521 CDD:467756 64/198 (32%)
PMT_4TMC 543..755 CDD:465056 56/250 (22%)

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