DRSC/TRiP Functional Genomics Resources

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Protein Alignment tw and PMT2

DIOPT Version :10

Sequence 1:NP_569858.1 Gene:tw / 31024 FlyBaseID:FBgn0086368 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_009379.2 Gene:PMT2 / 851210 SGDID:S000000021 Length:759 Species:Saccharomyces cerevisiae


Alignment Length:789 Identity:267/789 - (33%)
Similarity:386/789 - (48%) Gaps:108/789 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SVKDVAQNA-PRTAPTSSKE---ANWNWWLLLATVFLVTFA-----TRFYKVTEPDHICWDETHF 71
            ||.:...:| .|.|...|||   |..:...|.:.|..|.|.     ||.||:...:|:.|||.||
Yeast    32 SVSEELSSADERDAEDFSKEKPAAQSSLLRLESVVMPVIFTALALFTRMYKIGINNHVVWDEAHF 96

  Fly    72 GKMGSWYINRTFFFDVHPPLGKMLIGLSGYLTGYNGTFPFEKPGDKYNE-TRYQGMRYFCTTLGA 135
            ||.||:|:...|:.||||||||||:||||||.||||::.|.. |:.|.: ..|..||.|..:..|
Yeast    97 GKFGSYYLRHEFYHDVHPPLGKMLVGLSGYLAGYNGSWDFPS-GEIYPDYLDYVKMRLFNASFSA 160

  Fly   136 LIMPMGFDTVYDLTRSHEAALLAAAYLIFDVGLLTLNQYILLDPILLFFMMASVWGMVKVSKSTA 200
            |.:|:.:.|...:..|.....|....::|:....||.::||||.:||||.:||.:..|......:
Yeast   161 LCVPLAYFTAKAIGFSLPTVWLMTVLVLFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQRS 225

  Fly   201 SGGSYGLRWWLWLFLTGTMLSCTISVKFVGLFVVLLVGLHTATELWLILGDLGQPILETVKQLAC 265
            .  .:..:||.||.:||..|.||||||.||||::.:||::|..:||..|.|........:.....
Yeast   226 K--PFSRKWWKWLLITGISLGCTISVKMVGLFIITMVGIYTVIDLWTFLADKSMSWKTYINHWLA 288

  Fly   266 RAITLIVWPVLLYILFFYIHLSVLNRSGNGDGFYSSAFQSRLIGNSLYNASMPRDVAYG-SLVTI 329
            |...||:.|..:::|.|.||..:|:.||.||....|.||:||:|:.:  ...|||:|.| |:|:|
Yeast   289 RIFGLIIVPFCIFLLCFKIHFDLLSHSGTGDANMPSLFQARLVGSDV--GQGPRDIALGSSVVSI 351

  Fly   330 KNHKTGGGYLHSHHHLYPKGSGARQQQVTTYTHKDENNKWLIRPHNKPGPP-----KGKVQILRH 389
            ||...||..||||...||.||  .|||||.|.:||.||:|..  :.:.|.|     :..::.|:.
Yeast   352 KNQALGGSLLHSHIQTYPDGS--NQQQVTCYGYKDANNEWFF--NRERGLPSWSENETDIEYLKP 412

  Fly   390 GDLVRLTHMATRRNLHSHNEPAPMTKKHLQVTGYGELGLGDANDVWRVLIV---GGKVNETVHTV 451
            |...||.|.:|.||||:|...||::|...:|:|||:..:||..|.|.:.|:   |.:..|.:||:
Yeast   413 GTSYRLVHKSTGRNLHTHPVAAPVSKTQWEVSGYGDNVVGDNKDNWVIEIMDQRGDEDPEKLHTL 477

  Fly   452 TSRLKFIHLLQNCALTSSGKQLPKWGFEQQEVSC--NPNVRDKNSQWNVEDNEHKLMP--SVSFS 512
            |:..:..:|...|.|..:|..||:|||.||||.|  ||..|||.:.||:|.:|::.:|  ...|.
Yeast   478 TTSFRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMKNPFKRDKRTWWNIETHENERLPPRPEDFQ 542

  Fly   513 VYAPGFFARFLESHAVMLQGNAGLKP---KEGEVTSRPWQWP---INYRGQFFSGSSYRIYLLGN 571
            .....|...|:..:..|:..|..|.|   |...:.|..||||   :..|...:...:.:.:|||.
Yeast   543 YPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLASSAWQWPTLNVGLRLCGWGDDNPKYFLLGT 607

  Fly   572 PLIWWSNLVFLALFVTVFLCNAVVQQRRAGFARSAAQNQAQVPDSETVAQDEESEHSTTDICSCC 636
            |...|::.|.:..|:...:...:..||:....|                                
Yeast   608 PASTWASSVAVLAFMATVVILLIRWQRQYVDLR-------------------------------- 640

  Fly   637 TPAKEIVPKAVPSGSPEAPNPAQ---SLRAAAWLFLGWMLHYLPFWAMGRVLYFHHYFPALIFNS 698
                               ||:.   .|....:..|.|.|||:||..|.||.|.|||.|||.|..
Yeast   641 -------------------NPSNWNVFLMGGFYPLLAWGLHYMPFVIMSRVTYVHHYLPALYFAL 686

  Fly   699 LLTGVMYNYILRVLPKW--------IHHVILGLVLSILVYSFAAFSPLAYGMSGPLANEPNSTMY 755
            ::....::   ..|.||        :..|:....:::::..|..|||:::||.|     |:|...
Yeast   687 IILAYCFD---AGLQKWSRSKCGRIMRFVLYAGFMALVIGCFWYFSPISFGMEG-----PSSNFR 743

  Fly   756 NLKWLSTWE 764
            .|.|.|||:
Yeast   744 YLNWFSTWD 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twNP_569858.1 PMT 44..290 CDD:396786 98/251 (39%)
beta-trefoil_MIR_POMT2 321..503 CDD:467753 80/192 (42%)
PMT_4TMC 520..761 CDD:465056 58/257 (23%)
PMT2NP_009379.2 PMT 69..313 CDD:396786 97/246 (39%)
beta-trefoil_MIR_PMT2-like 339..531 CDD:467755 83/195 (43%)
PMT_4TMC 550..749 CDD:465056 58/257 (23%)

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