DRSC/TRiP Functional Genomics Resources

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Protein Alignment tw and Pomt2

DIOPT Version :10

Sequence 1:NP_569858.1 Gene:tw / 31024 FlyBaseID:FBgn0086368 Length:765 Species:Drosophila melanogaster
Sequence 2:XP_011242390.2 Gene:Pomt2 / 217734 MGIID:2444430 Length:837 Species:Mus musculus


Alignment Length:802 Identity:387/802 - (48%)
Similarity:507/802 - (63%) Gaps:98/802 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PRRGSVKDVAQNA------PRTAPTSSKEANWN--------WWLLLATVFLVTFATRFYKVTEPD 62
            ||||.....|..|      |:.|....|...|:        ||..||.|.|::|||||:::.:|.
Mouse    86 PRRGRCVPQAARAVSRDVVPQAAARKLKRPAWSSRRFQAAGWWATLAVVTLLSFATRFHRLDQPA 150

  Fly    63 HICWDETHFGKMGSWYINRTFFFDVHPPLGKMLIGLSGYLTGYNGTFPFEKPGDKYNETRYQGMR 127
            ||||||||||||||:|||||||||||||||||||||:|||:||:|||.|:||||:|....|.|||
Mouse   151 HICWDETHFGKMGSYYINRTFFFDVHPPLGKMLIGLAGYLSGYDGTFLFQKPGDRYEHHSYMGMR 215

  Fly   128 YFCTTLGALIMPMGFDTVYDLTRSHEAALLAAAYLIFDVGLLTLNQYILLDPILLFFMMASVWGM 192
            .||..||:.::|..:.||.||::|..||||.||.|.||.|.|||:|||||||||:||:||::..|
Mouse   216 GFCAFLGSWLIPFAYLTVLDLSKSFPAALLTAALLTFDTGCLTLSQYILLDPILMFFIMAAMLSM 280

  Fly   193 VKVSKSTASGGSYGLRWWLWLFLTGTMLSCTISVKFVGLFVVLLVGLHTATELWLILGDLGQPIL 257
            ||.  ::.:...:...||.||.|||..|:..:.|||||||:::.|||:|.::||.:.|||...::
Mouse   281 VKY--NSCANRPFSAPWWFWLSLTGISLAGALGVKFVGLFIIVQVGLNTISDLWHLFGDLSLSLV 343

  Fly   258 ETVKQLACRAITLIVWPVLLYILFFYIHLSVLNRSGNGDGFYSSAFQSRLIGNSLYNASMPRDVA 322
            ...|.|..|.:.|||.|::||:..|.:|:.|||:||.||||:|||||:||.||||:|||:|..:|
Mouse   344 TVGKHLTARILCLIVLPLVLYVTIFAVHVMVLNKSGPGDGFFSSAFQARLSGNSLHNASIPEHLA 408

  Fly   323 YGSLVTIKNHKTGGGYLHSHHHLYPKGSGARQQQVTTYTHKDENNKWLIRPHN---KPGPPKGKV 384
            |||::|:||.:...||||||.||||:|.||||||||||.|||.||.|:|:.:|   .|..|...|
Mouse   409 YGSVITVKNLRMAIGYLHSHRHLYPEGIGARQQQVTTYLHKDYNNLWIIKKYNANTDPLDPSFPV 473

  Fly   385 QILRHGDLVRLTHMATRRNLHSHNEPAPMTKKHLQVTGYGELGLGDANDVWRVLIVGGKVNETVH 449
            :.:||||::||.|..|.||||||...||:|:||.||||||..|.||:||.||:.:|..|....:.
Mouse   474 EFVRHGDIIRLEHKETTRNLHSHYHEAPLTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIK 538

  Fly   450 TVTSRLKFIHLLQNCALTSSGKQLPKWGFEQQEVSCNPNVRD-KNSQWNVEDNEHKLMPSVSFSV 513
            .:.||::.|||:..|.|.||||.|||||:||.||:|.|.::: .||.||:|::.:..:|::|..|
Mouse   539 VLRSRIRLIHLVTGCVLGSSGKILPKWGWEQLEVTCTPYLKETTNSIWNIEEHINPKLPNISLDV 603

  Fly   514 YAPGFFARFLESHAVMLQGNAGLKPKEGEVTSRPWQWPINYRGQFFSGSS---YRIYLLGNPLIW 575
            ..|.|....||||.||::||.|||||:.|.||:||.|||||:|..|||::   :|:||||||::|
Mouse   604 LQPSFPEILLESHMVMIRGNNGLKPKDNEFTSKPWHWPINYQGLRFSGANDTDFRVYLLGNPVVW 668

  Fly   576 WSNLVFLALFVTVFLCNAVVQQRRAGFARSAAQNQAQVPDSETVAQDEESEHSTTDICSCCTPAK 640
            |.|||.:.|::......||..||       ..|..|::.....|.                    
Mouse   669 WLNLVSIVLYLLSGSTIAVAMQR-------GIQLPAELQGLTKVL-------------------- 706

  Fly   641 EIVPKAVPSGSPEAPNPAQSLRAAAWLFLGWMLHYLPFWAMGRVLYFHHYFPALIFNSLLT---- 701
                                ||....|.|||||||.||:.|||:|||||||||::|:|:||    
Mouse   707 --------------------LRGGGQLLLGWMLHYFPFFLMGRILYFHHYFPAMLFSSMLTGSPG 751

  Fly   702 -------------GVMYNYILRV---------LPKWIHHV-ILGLVLSILVYSFAAFSPLAYGMS 743
                         |::::.:||:         |.:.||.| ||.|:|: ..|||..|.||||||.
Mouse   752 AVLIGWYMSLLSIGILWDTLLRLCAWGLAPSPLGRRIHAVGILSLLLT-TAYSFYLFHPLAYGMV 815

  Fly   744 GPLANEPNSTMYNLKWLSTWEF 765
            ||||.||.|.|..|:||.:|:|
Mouse   816 GPLAQEPESPMAGLRWLESWDF 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twNP_569858.1 PMT 44..290 CDD:396786 137/245 (56%)
beta-trefoil_MIR_POMT2 321..503 CDD:467753 100/185 (54%)
PMT_4TMC 520..761 CDD:465056 106/270 (39%)
Pomt2XP_011242390.2 PMT 132..376 CDD:396786 137/245 (56%)
beta-trefoil_MIR_POMT2 407..593 CDD:467753 100/185 (54%)
PMT_4TMC 612..833 CDD:465056 106/268 (40%)

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