DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz3 and szl

DIOPT Version :10

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001037971.1 Gene:szl / 733750 XenbaseID:XB-GENE-482077 Length:281 Species:Xenopus tropicalis


Alignment Length:118 Identity:35/118 - (29%)
Similarity:52/118 - (44%) Gaps:20/118 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 IAKLVP-------LIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPEL 196
            :|::||       |:::||...||..|||...|:|.....:|   |:.:|..||..|    .|.|
 Frog    56 MAEVVPKSAEWQNLLQTGCHPYARMFLCSLFAPVCLDTFIQP---CRSMCVAVRDSC----APVL 113

  Fly   197 M---ELWPSFLNCDGLPQPEKHELCMQ-IPQEVAVPGGSPSGPPTTGSPGVED 245
            .   ..||..|:||..|..|  ::|:. :.:|..........|...|.|.:||
 Frog   114 ACHGHAWPESLDCDRFPAGE--DMCLDTLSKEYQYSYKELPKPSCQGCPLIED 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM_1 22..83 CDD:425453
CRD_FZ <138..224 CDD:470581 29/95 (31%)
7tmF_FZD3_insect 290..587 CDD:320159
TM helix 1 299..324 CDD:320159
TM helix 2 333..354 CDD:320159
TM helix 3 383..409 CDD:320159
TM helix 4 426..442 CDD:320159
TM helix 5 469..493 CDD:320159
TM helix 6 513..540 CDD:320159
TM helix 7 548..573 CDD:320159
szlNP_001037971.1 CRD_sizzled 19..159 CDD:143561 31/111 (28%)
NTR_Sfrp1_like 153..281 CDD:239635 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.

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