DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz3 and Fzd2

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_742032.2 Gene:Fzd2 / 64512 RGDID:71012 Length:570 Species:Rattus norvegicus


Alignment Length:531 Identity:133/531 - (25%)
Similarity:218/531 - (41%) Gaps:128/531 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 DDEKGQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELM 197
            :|...::.:..||::..||...||.|||...|:||. :.:.:..|:.:||..|..|     ..||
  Rat    72 EDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTV-LEQAIPPCRSICERARQGC-----EALM 130

  Fly   198 E----LWPSFLNCDGLPQPEKHELCM-QIPQEVAVP---------------GGSPSGPPTTGSP- 241
            .    .||..|.|:..|:....::|: |...|...|               ||:|.||...|:| 
  Rat   131 NKFGFQWPERLRCEHFPRHGAEQICVGQNHSEDGTPALLTTAPPSGLQPGAGGTPGGPGGGGAPP 195

  Fly   242 --GVEDHPQTYRFWKSGASPTSDLAGVLCPQ----------NFSGSPFNPEECVPQCQ-----RD 289
              ...:||                  ..||:          .|.|.    .:|...|:     ..
  Rat   196 RYATLEHP------------------FHCPRVLKVPSYLSYKFLGE----RDCAAPCEPARPDGS 238

  Fly   290 AFHTSSQKKTSETLILGLSAVCFVLTLFALVTFWAEPTRFGYPERPVLFLCLCYNLFSVCYL--- 351
            .|.:..:.:.:...||..|.:|...|.|.:.|:..:..||.|||||::||..||.:.||.|:   
  Rat   239 MFFSQEETRFARLWILTWSVLCCASTFFTVTTYLVDMQRFRYPERPIIFLSGCYTMVSVAYIAGF 303

  Fly   352 ---ERIVFHNQARMHDVELQWRLM-----RPGCLLTPPCLASYITTSYLSLCAASWWLIFALCFY 408
               ||:|.:.:..    |..:|.:     :.||.:.      ::...:.|:.::.||:|.:|.::
  Rat   304 VLQERVVCNERFS----EDGYRTVVQGTKKEGCTIL------FMMLYFFSMASSIWWVILSLTWF 358

  Fly   409 LSSHKKWSSEALEKRSGLFHVLAWVPPLAPPIAALLLEKVRPSELTGMCYA--------PGFVEL 465
            |::..||..||:|..|..||:.||..|....|..|.:.::....|:|:|:.        .|||..
  Rat   359 LAAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVGLNSLDPLRGFVLA 423

  Fly   466 PALVLLLLGLYFTLRASRSLLSLQQQLQPTLAHH------RFGQIRKRFVLFSLLYFAPTTAGV- 523
            |..|.|.:|..|.|....||..::     |:..|      :..::..|..:||:||..|.|..: 
  Rat   424 PLFVYLFIGTSFLLAGFVSLFRIR-----TIMKHDGTKTEKLERLMVRIGVFSVLYTVPATIVIA 483

  Fly   524 ----------------VAALCERYADSVPSCSTPDDCLSPTPLSAWPALVRIFFQLVGGTLTGLW 572
                            |:..|:..|...|:..||.  :|| ..:.:  :::....|:.|..:|.|
  Rat   484 CYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPR--MSP-DFTVY--MIKYLMTLIVGITSGFW 543

  Fly   573 VWSRKTCESYR 583
            :||.||..|:|
  Rat   544 IWSGKTLHSWR 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 26/90 (29%)
Frizzled 291..584 CDD:279827 89/335 (27%)
Fzd2NP_742032.2 CRD_FZ2 40..166 CDD:143573 28/99 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..194 7/27 (26%)
7tmF_FZD2 239..568 CDD:320373 89/336 (26%)
TM helix 1 249..273 CDD:320373 7/23 (30%)
TM helix 2 282..303 CDD:320373 10/20 (50%)
TM helix 3 333..355 CDD:320373 4/27 (15%)
TM helix 4 376..392 CDD:320373 6/15 (40%)
TM helix 5 414..437 CDD:320373 8/22 (36%)
TM helix 6 468..490 CDD:320373 6/21 (29%)
TM helix 7 519..544 CDD:320373 5/27 (19%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 548..553 2/4 (50%)
PDZ-binding 568..570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334860
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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