DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz3 and fzd3b

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001074070.1 Gene:fzd3b / 567746 ZFINID:ZDB-GENE-070122-1 Length:667 Species:Danio rerio


Alignment Length:502 Identity:128/502 - (25%)
Similarity:192/502 - (38%) Gaps:130/502 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELMEL----WPSFL 204
            |::...||...|..||:...|:|. :..|....|:.||...:.:|.     :||::    ||..:
Zfish    79 PMVNLQCSPDLRPFLCALYAPVCM-EYGRVSLPCRSLCHHAKRDCQ-----KLMDMFGVTWPEEM 137

  Fly   205 NCDGLPQ-----PEKHELCMQIPQEVAVPGGSPSGPPTTGSP-GVEDHPQTYRFWKSGASPTSDL 263
            .|...|.     |...:|.:             ...||..|| .|:   :.|.||          
Zfish   138 ECTRFPDCDESYPRAEDLLV-------------IDDPTDQSPMSVQ---RDYGFW---------- 176

  Fly   264 AGVLCPQNFSGSP------FNPEECVPQCQRDAFHTSSQKKTSETLILG-LSAVCFVLTLFALVT 321
                ||:.....|      ....:|.|.|....|.  .::.|.....:| :|.||...|||..:|
Zfish   177 ----CPRELKMEPDLGYTFLGVRDCSPPCPNMYFR--REELTFARYFIGVVSIVCLSATLFTFLT 235

  Fly   322 FWAEPTRFGYPERPVLFLCLCYNLFSVCY-----LERIVFHNQARMHDVELQWRLMRPGCLLT-- 379
            |..:.|||.|||||::|..:||.:.|:.:     ||..|..|.|            .||...|  
Zfish   236 FLIDVTRFRYPERPIIFYAVCYMMVSLVFFLGFLLEDRVACNSA------------NPGQYKTST 288

  Fly   380 -------PPCLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALEKRSGLFHVLAWVPPLA 437
                   ..|...::...:.::..:.||:|..:.::|::..||.|||:||::.|||..||..|..
Zfish   289 VTQGSHNKACTLLFMVLYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKALLFHASAWGIPGM 353

  Fly   438 PPIAALLLEKVRPSELTGMCY--------------APGFVELPALVLLLLGLYFTLRASRSLLSL 488
            ..||.|.|.|:....::|:|:              ||..:::...|.|||.....|...|..:.|
Zfish   354 LTIALLALNKIEGDNISGVCFVGVYDVQTLRWFVLAPLCLDVLVGVSLLLAGIVALNRVRMEIPL 418

  Fly   489 QQQLQPTLAHHRFGQIRKRFVLFSLLYFAP--TTAGV---------------VAALCERYADSVP 536
            :::.|..|.     :...|..:||:||..|  |..|.               |...|..|....|
Zfish   419 EKENQEKLV-----KFMIRIGVFSVLYLVPLLTVVGCYLYEQTYRSVWETTWVQERCREYHIPCP 478

  Fly   537 ----SCSTPDDCLSPTPLSAWPALVRIFFQLVGGTLTGLWVWSRKTC 579
                ..|.||..|         .|::....||.|..:..||.|:|||
Zfish   479 FKVEQTSRPDLVL---------FLIKYLMVLVVGIPSVFWVGSKKTC 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 21/88 (24%)
Frizzled 291..584 CDD:279827 93/339 (27%)
fzd3bNP_001074070.1 CRD_FZ 36..162 CDD:382974 21/101 (21%)
7tmF_FZD3 204..524 CDD:320161 93/341 (27%)
TM helix 1 213..238 CDD:320161 9/24 (38%)
TM helix 2 247..268 CDD:320161 7/20 (35%)
TM helix 3 299..325 CDD:320161 3/25 (12%)
TM helix 4 342..364 CDD:320161 10/21 (48%)
TM helix 5 378..403 CDD:320161 4/24 (17%)
TM helix 6 431..456 CDD:320161 8/24 (33%)
TM helix 7 485..510 CDD:320161 8/33 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574105
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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