DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz3 and fzd3a

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_005160805.1 Gene:fzd3a / 565921 ZFINID:ZDB-GENE-990415-225 Length:686 Species:Danio rerio


Alignment Length:505 Identity:129/505 - (25%)
Similarity:195/505 - (38%) Gaps:136/505 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELMEL----WPSFL 204
            |::...||...|..||:...|:|| :..|....|:.||:..:.:|.     :|||:    ||..:
Zfish    69 PMVNLECSTEIRPFLCALYAPVCT-EYGRVTLPCRRLCQRAKSDCY-----KLMEMFGVSWPDEM 127

  Fly   205 NCDGLPQPEKHELCMQIPQEVAVPGGSPSGPPTTGSPGVEDHPQTYRFWKSGASPTSDLAGVLCP 269
            .|...|:.|:     ..|:.:.:   .||...|..||....  :.|.||              ||
Zfish   128 ECSRFPECEE-----SYPRAIDL---LPSSDSTEESPSAVQ--RDYGFW--------------CP 168

  Fly   270 QNFSGSP------FNPEECVPQCQRDAFHTSSQKKTSETLILG------LSAVCFVLTLFALVTF 322
            :.....|      ....:|.|.|....|.       .:.||..      :|.||...|||..:||
Zfish   169 RELKIEPDLGYSFMGVRDCSPPCPNMYFR-------KDELIFARYFIGVISIVCLSATLFTFLTF 226

  Fly   323 WAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDVELQWRLMRPGCLLTPP------ 381
            ..:..||.|||||::|..:||.:.|      :||.....:.|        |..|....|      
Zfish   227 LIDVGRFRYPERPIIFYAVCYMMVS------LVFFLGFLLED--------RVSCNTASPGRFRAS 277

  Fly   382 ----------CLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALEKRSGLFHVLAWVPPL 436
                      |...::|..:.::..:.||:|..:.::|::..||.|||:||::.|||.:||..|.
Zfish   278 TITQGSHNKACTLLFMTLYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKALLFHAVAWGVPG 342

  Fly   437 APPIAALLLEKVRPSELTGMCYAPGFVELPAL----------------VLLLLGLYFTLRASRSL 485
            |..|..:.:.|:....::|:|:. |..:|.||                ||||.|: ..|...|..
Zfish   343 ALTITLMAMNKIEGDSMSGVCFV-GLYDLMALRWFLLVPLVLDVIVGVVLLLAGI-AALNRVRME 405

  Fly   486 LSLQQQLQPTLAHHRFGQIRKRFVLFSLLYFAP--TTAGV---------------VAALCERYAD 533
            :.|:::.|..|.     :...|..:||:||..|  |..|.               |...|..|..
Zfish   406 IPLEKENQDKLV-----KFMIRIGVFSVLYLVPLLTVIGCYLYEQSHRSVWETTWVQERCREYHI 465

  Fly   534 SVP----SCSTPDDCLSPTPLSAWPALVRIFFQLVGGTLTGLWVWSRKTC 579
            ..|    ..|.||..|         .|::....||.|..:..||.|:|||
Zfish   466 PCPFKVEKTSRPDIAL---------FLIKYLMMLVVGIPSVFWVGSKKTC 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 23/83 (28%)
Frizzled 291..584 CDD:279827 92/348 (26%)
fzd3aXP_005160805.1 CRD_FZ3 26..152 CDD:143558 25/96 (26%)
Frizzled 195..513 CDD:279827 92/349 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574106
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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