DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz3 and fzd2

DIOPT Version :10

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001008449.1 Gene:fzd2 / 493345 XenbaseID:XB-GENE-487022 Length:553 Species:Xenopus tropicalis


Alignment Length:511 Identity:132/511 - (25%)
Similarity:215/511 - (42%) Gaps:101/511 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 DDEKGQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELM 197
            :|...::.:..||::..||...||.|||...|:||. :.:.:..|:.:||..|..|     ..||
 Frog    68 EDAGLEVHQFYPLVKVQCSSELRFFLCSMYAPVCTV-LEQAIPPCRSICERARHGC-----EALM 126

  Fly   198 E----LWPSFLNCDGLPQPEKHELCMQIPQEVAVPGGS---PSGPPTTGSPG-----VEDHPQTY 250
            .    .||..|.|:..|:....::|  :.|..:..||.   .:.||..|:||     ..|||   
 Frog   127 NKFGFQWPERLRCENFPRHGAEQIC--VGQNHSEDGGPTLLTTSPPHHGTPGPPIYATLDHP--- 186

  Fly   251 RFWKSGASPTSDLAGVLCPQ----------NFSGSPFNPEECVPQCQ---RDAFHTSSQK--KTS 300
                           ..||:          .|.|.    ::|...|:   .|.|...||.  :.:
 Frog   187 ---------------FHCPRVLKVPSYLNYRFLGE----KDCAAPCEPSKNDGFMFFSQDEIRFA 232

  Fly   301 ETLILGLSAVCFVLTLFALVTFWAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHD- 364
            ...||..|.:|...|.|.:.|:..:..||.|||||::||..||.:.||.|:...|..|:...:: 
 Frog   233 RVWILIWSVLCCASTFFTVTTYLVDMQRFRYPERPIIFLSGCYTMVSVAYIAGFVLGNKVVCNEN 297

  Fly   365 -VELQWRLM-----RPGCLLTPPCLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALEKR 423
             .|..::.:     :.||.:.      ::...:.|:.::.||:|.:|.::|::..||..||:|..
 Frog   298 FSEGGYKTVVQGTKKEGCTIL------FMMLYFFSMASSIWWVILSLTWFLAAGMKWGHEAIEAN 356

  Fly   424 SGLFHVLAWVPPLAPPIAALLLEKVRPSELTGMCYA--------PGFVELPALVLLLLGLYFTLR 480
            |..||:.||..|....|..|.:.::....|:|:|:.        .|||..|..|.|.:|..|.|.
 Frog   357 SQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVGLNNIDPLRGFVLAPLFVYLFIGTSFLLA 421

  Fly   481 ASRSLLSLQQQLQPTLAHH------RFGQIRKRFVLFSLLYFAPTTAGVVAALCER-YADSVPSC 538
            ...||..::     |:..|      :..::..|..:||:||..|.|..:.....|: :.:.....
 Frog   422 GFVSLFRIR-----TIMKHDGTKTEKLERLMVRIGVFSVLYTVPATIVIACYFYEQAFREHWERS 481

  Fly   539 STPDDCLS---PTPLSAWPA--------LVRIFFQLVGGTLTGLWVWSRKTCESYR 583
            ....:|.|   |.||...|.        :::....|:.|..:|.|:||.||..|:|
 Frog   482 WVSQNCKSLAIPCPLQYTPRMTPDFTVYMIKYLMTLIVGITSGFWIWSGKTLHSWR 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM_1 22..83 CDD:425453
CRD_FZ <138..224 CDD:470581 25/89 (28%)
7tmF_FZD3_insect 290..587 CDD:320159 88/329 (27%)
TM helix 1 299..324 CDD:320159 7/24 (29%)
TM helix 2 333..354 CDD:320159 10/20 (50%)
TM helix 3 383..409 CDD:320159 5/25 (20%)
TM helix 4 426..442 CDD:320159 6/15 (40%)
TM helix 5 469..493 CDD:320159 7/23 (30%)
TM helix 6 513..540 CDD:320159 5/27 (19%)
TM helix 7 548..573 CDD:320159 6/32 (19%)
fzd2NP_001008449.1 CRD_FZ2 36..162 CDD:143573 28/101 (28%)
7tmF_FZD2 222..551 CDD:320373 87/327 (27%)
TM helix 1 231..256 CDD:320373 7/24 (29%)
TM helix 2 265..286 CDD:320373 10/20 (50%)
TM helix 3 316..342 CDD:320373 5/31 (16%)
TM helix 4 359..375 CDD:320373 6/15 (40%)
TM helix 5 397..426 CDD:320373 9/28 (32%)
TM helix 6 446..473 CDD:320373 8/26 (31%)
TM helix 7 502..527 CDD:320373 3/24 (13%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.