DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz3 and fzd6

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_956855.1 Gene:fzd6 / 393533 ZFINID:ZDB-GENE-040426-1451 Length:617 Species:Danio rerio


Alignment Length:517 Identity:137/517 - (26%)
Similarity:204/517 - (39%) Gaps:122/517 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 DDYKSDDEKGQIAKLVPLIESGCSRRARFLLCSSLFPLCT--------PDVPRPVAACKLLCETV 184
            :.|..|....::.:.:||:...||..|...||.:..|.|.        ..|.||   |:..||.|
Zfish    47 EHYDQDIAAVRMKEFMPLVSVRCSPDAHLFLCQAFVPECRTHSHSQTHTHVLRP---CRERCERV 108

  Fly   185 RGECMENAPPELMEL-WPSFLNCDGLPQPEKHELCMQIPQEVAVPGGSPSGPPTTGSPGVEDHPQ 248
            |.:|  .|.....:: |||.|.|      |:.|.|          |||.....|.|..|....|:
Zfish   109 RSDC--RAVMHTFDISWPSELQC------ERLESC----------GGSAVDVTTAGRSGAGSSPR 155

  Fly   249 TYRFWKSGASPTSDLAGVLCPQNF------SGSPFNPEECVPQCQRDAFHTSSQKKTSETLILGL 307
            ...||              ||...      |||.....:|.|.|: :.|.|::::..:...|...
Zfish   156 DLGFW--------------CPLQLKLRPGQSGSFLGAPDCAPPCE-NMFLTAAEQHLARLFIGVC 205

  Fly   308 SAVCFVLTLFALVTFWAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDVELQWRL- 371
            |.||...|||..:||..:..||.|||||::|:.:||...|:.||               |.:.| 
Zfish   206 SVVCLCATLFTFLTFLMDAQRFRYPERPIVFISVCYCAVSLLYL---------------LGFMLG 255

  Fly   372 --------MRPGCLLT-------PPCLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALE 421
                    .|||.:.|       ..|...:....:.|.....||:|..:.::|::..|||.||::
Zfish   256 PSVACGAPGRPGGVWTVVLGARSRGCSLLFTLLYFCSTAGMLWWVILTITWFLAAGPKWSCEAIQ 320

  Fly   422 KRSGLFHVLAWVPPLAPPIAALLLEKVRPSELTGMCYAPGFVELPAL---------VLLLLGLYF 477
            |::..||...|..|....:..|.|.||....::|:|:. |..:|.||         :.:||||..
Zfish   321 KQALWFHAAGWGVPAVLTLLLLALGKVEGDGISGVCFT-GLYDLTALRWFLVAPLALAVLLGLAL 384

  Fly   478 TLRASRSLLSLQQQLQPTLAHHRFGQIR-KRFVL----FSLLYFAPT-----------------T 520
            .|....:|..::|.:|    |.:..|.: |||::    ||.||..|.                 .
Zfish   385 LLAGIVALNRVRQVIQ----HDQLNQQKLKRFMIRIGVFSGLYLLPLLLLLGCYLYEMTQRRVWE 445

  Fly   521 AGVVAALCERYADSVPSCSTPDDCLSPTPLSAWPALVRIFFQLVGGTLTGLWVWSRKTCESY 582
            :..|...|:.:  |:|...|....:....||.:  |::....|..|.....||.|||||..:
Zfish   446 SSWVNRHCQEF--SIPCARTSSGGVQHPGLSLF--LLKYLMTLAVGIPAVFWVSSRKTCSRW 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 27/94 (29%)
Frizzled 291..584 CDD:279827 91/339 (27%)
fzd6NP_956855.1 CRD_FZ6 20..154 CDD:143559 35/127 (28%)
7tm_GPCRs 188..508 CDD:391938 91/340 (27%)
TM helix 1 198..222 CDD:341315 9/23 (39%)
TM helix 2 231..252 CDD:341315 10/35 (29%)
TM helix 3 282..304 CDD:341315 4/21 (19%)
TM helix 4 325..341 CDD:341315 4/15 (27%)
TM helix 5 363..386 CDD:341315 7/22 (32%)
TM helix 6 414..439 CDD:341315 5/24 (21%)
TM helix 7 469..494 CDD:341315 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.