DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz3 and tlc

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_938176.1 Gene:tlc / 386615 ZFINID:ZDB-GENE-031020-1 Length:282 Species:Danio rerio


Alignment Length:100 Identity:36/100 - (36%)
Similarity:50/100 - (50%) Gaps:20/100 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 EKGQIAKL-------VPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENA 192
            |..|:|::       |||:...||..||..||....|:|.| :..|:..|:.:||.||..|   |
Zfish    53 EHEQMAEVLQQEWRWVPLLNKECSPDARIFLCCLFAPICWP-LDSPIYPCRSVCEAVRSGC---A 113

  Fly   193 PPELME----LWPSFLNCDGLPQPEKHELCMQIPQ 223
            |  ||:    .||..|:||..  |..::||:. ||
Zfish   114 P--LMKAYGFTWPESLHCDKF--PVDNDLCIS-PQ 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 34/96 (35%)
Frizzled 291..584 CDD:279827
tlcNP_938176.1 CRD_crescent 26..162 CDD:143562 35/99 (35%)
NTR_Sfrp1_like 154..278 CDD:239635
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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