DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz3 and Fzd8

DIOPT Version :10

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001037716.1 Gene:Fzd8 / 364754 RGDID:1560525 Length:684 Species:Rattus norvegicus


Alignment Length:581 Identity:155/581 - (26%)
Similarity:227/581 - (39%) Gaps:153/581 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 DYKSDDEKG-QIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENA 192
            ::.:.||.| ::.:..||:|..||...:|.|||...|:|..|..:|:..|:.:||..:..|   |
  Rat    58 NHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYKKPLPPCRSVCERAKAGC---A 119

  Fly   193 PPELME----LWPSFLNCDGLP-QPEKHELCMQI------------PQEVAVP------------ 228
            |  ||.    .||..:.||.|| |.....|||..            |:.:..|            
  Rat   120 P--LMRQYGFAWPDRMRCDRLPEQGNPDTLCMDYNRTDLTTAAPSPPRRLPPPQPGEQPPSGSGH 182

  Fly   229 -----------GGSPSG-------PPTTGS----PGVEDHPQTYRFWKSGASPTSDLAGVLCPQN 271
                       |||..|       ||:.|.    ||            .||:|.........|..
  Rat   183 SRPPGARPPHRGGSSRGSGDTAAAPPSRGGKARPPG------------GGAAPCEPGCQCRAPMV 235

  Fly   272 FSGSPFNP----------EECVPQCQRDAFHTSSQKKTSETLI-LGL-SAVCFVLTLFALVTFWA 324
            ...|..:|          ..|...|....|   ||.:.:.|:. :|| |.:|||.|...:.||..
  Rat   236 SVSSERHPLYNRVKTGQIANCALPCHNPFF---SQDERAFTVFWIGLWSVLCFVSTFATVSTFLI 297

  Fly   325 EPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQ------------------------------ 359
            :..||.|||||::||..||...||.||.|:|..::                              
  Rat   298 DMERFKYPERPIIFLSACYLFVSVGYLVRLVAGHEKVACSGGAPGAGGAGGAGGAATAGAGAAGA 362

  Fly   360 ------AR-----MHDVELQWRLMRPGCLLTPPCLASYITTSYLSLCAASWWLIFALCFYLSSHK 413
                  ||     :..||...|....|..|   |...::...:..:.::.||:|.:|.::|::..
  Rat   363 GASSPGARGEYEELGAVEQHVRYETTGPAL---CTVVFLLVYFFGMASSIWWVILSLTWFLAAGM 424

  Fly   414 KWSSEALEKRSGLFHVLAWVPPLAPPIAALLLEKVRPSELTGMCYA--------PGFVELPALVL 470
            ||.:||:...|..||:.||:.|....||.|.|..|....:.|:||.        .|||..|.::.
  Rat   425 KWGNEAIAGYSQYFHLAAWLVPSVKSIAVLALSSVDGDPVAGICYVGNQSLDNLRGFVLAPLVIY 489

  Fly   471 LLLGLYFTLRASRSLLS----LQQQLQPTLAHHRFGQIRKRFVLFSLLYFAPTTAGVVAALCERY 531
            |.:|..|.|....||..    ::||..||.. |:..::..|..||::||..|....|.....|::
  Rat   490 LFIGTMFLLAGFVSLFRIRSVIKQQGGPTKT-HKLEKLMIRLGLFTVLYTVPAAVVVACLFYEQH 553

  Fly   532 A----DSVPSCS-----TPDDCLSPTPLSAWPALVRIFFQLVGGTLTGLWVWSRKTCESYR 583
            .    ::..:|.     .||....|   .....:::.|..||.|..:|:||||.||.||:|
  Rat   554 NRPRWEATHNCPCLRDLQPDQARRP---DYAVFMLKYFMCLVVGITSGVWVWSGKTLESWR 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM_1 22..83 CDD:425453
CRD_FZ <138..224 CDD:470581 32/102 (31%)
7tmF_FZD3_insect 290..587 CDD:320159 102/358 (28%)
TM helix 1 299..324 CDD:320159 10/26 (38%)
TM helix 2 333..354 CDD:320159 11/20 (55%)
TM helix 3 383..409 CDD:320159 4/25 (16%)
TM helix 4 426..442 CDD:320159 6/15 (40%)
TM helix 5 469..493 CDD:320159 8/27 (30%)
TM helix 6 513..540 CDD:320159 6/35 (17%)
TM helix 7 548..573 CDD:320159 5/24 (21%)
Fzd8NP_001037716.1 CRD_FZ8 31..155 CDD:143570 34/101 (34%)
Wnt-binding. /evidence=ECO:0000250 95..100 1/4 (25%)
Wnt-binding. /evidence=ECO:0000250 147..152 3/4 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..222 12/78 (15%)
7tmF_FZD8 263..615 CDD:320378 102/359 (28%)
TM helix 1 272..297 CDD:320378 10/24 (42%)
TM helix 2 306..327 CDD:320378 11/20 (55%)
TM helix 3 394..416 CDD:320378 3/21 (14%)
TM helix 4 437..453 CDD:320378 6/15 (40%)
TM helix 5 475..498 CDD:320378 7/22 (32%)
TM helix 6 528..553 CDD:320378 8/24 (33%)
TM helix 7 576..601 CDD:320378 6/27 (22%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 605..610 3/4 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..655
PDZ-binding. /evidence=ECO:0000250 682..684
Blue background indicates that the domain is not in the aligned region.

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