DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz3 and Smo

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_795970.3 Gene:Smo / 319757 MGIID:108075 Length:793 Species:Mus musculus


Alignment Length:560 Identity:130/560 - (23%)
Similarity:203/560 - (36%) Gaps:108/560 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 SDDEKGQIAKLVPLIESGCSRRARF------LLCSSLFPLCTPDVPRPVAACKLLCETVRGECME 190
            ||.::....|||  :.||.....|.      |||:...|.|..|  |.....:.||:..||.|  
Mouse   100 SDSQEEAHGKLV--LWSGLRNAPRCWAVIQPLLCAVYMPKCEND--RVELPSRTLCQATRGPC-- 158

  Fly   191 NAPPELMELWPSFLNCDGLPQPEKHELCMQIPQEVAVPGGSPSGPPTTGSPGVEDHPQTYRFWKS 255
             |..|....||.||.|                    .|...|.|.|        :..|..:|..|
Mouse   159 -AIVERERGWPDFLRC--------------------TPDHFPEGCP--------NEVQNIKFNSS 194

  Fly   256 GASPTSDLAGVLCPQNFSGSPFNPEECVPQCQRDAFHTSSQKKTSETLILGLSAVCFVLTLFALV 320
            |...    |.::...|......:.|.|..|||...| |.::.:...:.|....||..:.|||.|.
Mouse   195 GQCE----APLVRTDNPKSWYEDVEGCGIQCQNPLF-TEAEHQDMHSYIAAFGAVTGLCTLFTLA 254

  Fly   321 TF---WAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDV---ELQWRLMRPGCLLT 379
            ||   |....|  ||...:.::..|:.:.|:.:|.:  |.:.||...|   :...|...|....|
Mouse   255 TFVADWRNSNR--YPAVILFYVNACFFVGSIGWLAQ--FMDGARREIVCRADGTMRFGEPTSSET 315

  Fly   380 PPCLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSS-EALEKRSGLFHVLAWVPPLAPPIAAL 443
            ..|:..::...|..:....|:::....::.|.....:: :.|..::..||:|.|..|....:|.|
Mouse   316 LSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFHLLTWSLPFVLTVAIL 380

  Fly   444 LLEKVRPSELTGMC--------YAPGFVELPALVLLLLGLYFTLRASRSLLSLQQQLQPTLAHHR 500
            .:.:|....::|:|        |..|||..|..::|::|.||.:|...:|.|::......|:...
Mouse   381 AVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKA 445

  Fly   501 FGQIRK---RFVLFSLLYFAPTTAGVVA-----------------------ALCE-RYADSVPSC 538
            ..:|.:   |..:|..|.|     |.|.                       .||: .....:|:.
Mouse   446 ASKINETMLRLGIFGFLAF-----GFVLITFSCHFYDFFNQAEWERSFRDYVLCQANVTIGLPTK 505

  Fly   539 STPDDCLSPTPLSAWPALVRIFFQLVGGTLTGLWVWSRKTCESYRN---RL-GASGTPTSSLMNQ 599
            ....||......|.....:.:|.....|.....|||::.|...:|.   || |.|......:...
Mouse   506 KPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLTGHSDDEPKRIKKS 570

  Fly   600 SKAAGALPKKH--LYTSGK----SMLPTGGITPLYAGISF 633
            ...|.|..|:.  |...|:    ||.......|: ||::|
Mouse   571 KMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPV-AGLAF 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 25/91 (27%)
Frizzled 291..584 CDD:279827 72/334 (22%)
SmoNP_795970.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..61
CRD_SMO 70..200 CDD:143560 35/138 (25%)
Frizzled 225..554 CDD:279827 73/338 (22%)
Interaction with BBS5 and BBS7. /evidence=ECO:0000269|PubMed:22072986 542..573 6/30 (20%)
Interaction with DLG5. /evidence=ECO:0000269|PubMed:25644602 585..597 3/11 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 674..703
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D509772at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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