DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz3 and fzd4

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001292398.1 Gene:fzd4 / 30363 ZFINID:ZDB-GENE-990415-217 Length:523 Species:Danio rerio


Alignment Length:492 Identity:140/492 - (28%)
Similarity:222/492 - (45%) Gaps:84/492 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 DEKGQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELME 198
            |.:.|:....|||:.|||.:.:|.|||...|:||..||.|:..|..:|.:|:.:|:    |.|.|
Zfish    58 DAELQLTTFTPLIQYGCSSQLKFFLCSVYVPMCTEKVPIPIGPCGSMCMSVKRKCL----PVLQE 118

  Fly   199 ---LWPSFLNCDGLPQP-EKHELCMQIPQEVAVP--GGSPSGPP-----TTGSPGVEDHPQTYRF 252
               :||..|||...|.. :::.:||:.|.:...|  ...|..|.     ..|: |||.:....| 
Zfish   119 FGFVWPELLNCSLFPPTNDQNHMCMEGPGDEDPPFHAVRPVAPQEEECIALGA-GVEQYAWVKR- 181

  Fly   253 WKSGASPTSDLAGVLCPQNFSGSPFNPEECVPQCQRDAFHTSSQKKTSETLILGLSAV-CFVLTL 316
                                |||      |..||..|......|.|....:.:.:.|| ||:.|.
Zfish   182 --------------------SGS------CSLQCGYDTGLYRRQAKVFTDVWMAVWAVLCFISTT 220

  Fly   317 FALVTFWAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDVE-------LQWRLMRP 374
            |.::||..:.:||.|||||::||.:|.|::||.::.|:....:....|:|       :|..|...
Zfish   221 FTVLTFLVDSSRFSYPERPIIFLSMCCNIYSVAFIVRLTVGRERISCDLEEAAVPVLVQEGLKNT 285

  Fly   375 GCLLTPPCLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALEKRSGLFHVLAWVPPLAPP 439
            ||.:.      ::.|.:..:.::.||:|..|.::|::..||..||:|..|..||:.||..|....
Zfish   286 GCAIV------FLLTYFFGMASSIWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKT 344

  Fly   440 IAALLLEKVRPSELTGMCYA--------PGFVELPALVLLLLGLYFTLRASRSLLSLQQQLQPT- 495
            |..|::..|...:|.||||.        .|||..|....|::|..|......:|..::..||.. 
Zfish   345 IVILIMRLVDADDLAGMCYVGNQNLDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQKDG 409

  Fly   496 LAHHRFGQIRKRFVLFSLLYFAPTTAGVVAALCE--RYADSVPSCSTPDDCLSPTPLSAWPA--L 556
            ....:..::..:..:||:||..|.|..:.....|  .:||           ...|...::.|  :
Zfish   410 TKTDKLERLMVKIGVFSVLYTVPATCVIACYFYEISNWAD-----------FRQTARDSYMAAEM 463

  Fly   557 VRIFFQLVGGTLTGLWVWSRKTCESYR---NRLGASG 590
            :|||..|:.|..:|:||||.||..:::   :||..:|
Zfish   464 LRIFMSLLVGITSGMWVWSAKTLHTWQRCSHRLVHTG 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 33/89 (37%)
Frizzled 291..584 CDD:279827 88/316 (28%)
fzd4NP_001292398.1 CRD_FZ4 26..150 CDD:143557 34/95 (36%)
Frizzled 195..492 CDD:279827 88/313 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D509772at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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