DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz3 and Fzd6

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001124008.1 Gene:Fzd6 / 282581 RGDID:628816 Length:710 Species:Rattus norvegicus


Alignment Length:552 Identity:141/552 - (25%)
Similarity:222/552 - (40%) Gaps:107/552 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 QIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELMEL--- 199
            ::...:||....||......||.:..|.||..:. .|:.|:.|||.:..:|.     :||:.   
  Rat    57 EMEHFLPLANLECSPNIEMFLCQAFVPTCTEQID-VVSPCRKLCEKILSDCQ-----KLMDTFGI 115

  Fly   200 -WPSFLNCDGLPQPEKHELCMQIPQEVAVPGGSPSGPPTTGSPGVEDH-PQTYRFWKSGASPTSD 262
             ||..|.|..||      .|     :.|||..|.......|.....|. |:...||         
  Rat   116 RWPEELECHRLP------YC-----DGAVPVTSDPHTELFGPQKKTDQVPRDIGFW--------- 160

  Fly   263 LAGVLCPQNF--SGSP----FNPEECVPQCQRDAFHTSSQKKTSETLILGLSAVCFVLTLFALVT 321
                 ||::.  ||..    ...::|.|.|. :.:..|.:...:::.|..:|..|...|||..:|
  Rat   161 -----CPKHLRTSGDQGYRFLGIDQCAPPCP-NMYFKSDELDFAKSFIGIVSIFCLCATLFTFLT 219

  Fly   322 FWAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDVELQWRLMRPGCL--LTPPCLA 384
            |..:..||.|||||:::..:||::.|:.|....:..|....:..:.:..|.....|  ....|..
  Rat   220 FLIDVRRFRYPERPIIYYSVCYSIVSLMYFVGFLLGNSTACNKADEKLELGNTVVLGSKNKACSV 284

  Fly   385 SYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALEKRSGLFHVLAWVPPLAPPIAALLLEKVR 449
            .::...:.::....||:|..:.::|::.:|||.||:|:::..||.:||..|....:..|.:.||.
  Rat   285 VFMFLYFFTMAGTVWWVILTITWFLAAGRKWSCEAIEQKAVWFHAVAWGMPGFLTVMLLAMNKVE 349

  Fly   450 PSELTGMCY--------APGFVELPALVLLLLGLYFTLRASRSLLSLQQQLQPTLAHHRFGQIR- 505
            ...::|:|:        :..||.||..:.:.:||...|....||..::|.:|    |....|.: 
  Rat   350 GDNISGVCFVGLYDLDASRYFVLLPLCLCVFVGLSLLLAGIISLNHVRQVIQ----HDGRNQEKL 410

  Fly   506 KRFVL----FSLLYFAP--TTAG-VVAALCERYADSVPSCSTPDDCLS---PTPLSAWPA----- 555
            |:|::    ||.||..|  |..| .|..|..|....:...|  |.|..   |.|..|.|.     
  Rat   411 KKFMIRIGVFSGLYLVPLVTLLGCYVYELVNRVTWEMTWFS--DHCHQYRIPCPYQANPKARPEL 473

  Fly   556 ---LVRIFFQLVGGTLTGLWVWSRKTCESY-----RNRLGASGTPTSS------------LMNQS 600
               :::....|:.|.....||.|:|||..:     |||   ...|.|.            |.:.|
  Rat   474 ALFMIKYLMTLIVGISAVFWVGSKKTCTEWAGFCKRNR---KRDPISESRRVLQESCEFFLKHNS 535

  Fly   601 KAAGALPKKH-------LYTSGKSMLPTGGIT 625
            |...  .|||       |....|||..:.|:|
  Rat   536 KVRH--KKKHGKPGSHKLKVISKSMGTSTGVT 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 24/89 (27%)
Frizzled 291..584 CDD:279827 84/326 (26%)
Fzd6NP_001124008.1 CRD_FZ6 20..146 CDD:143559 28/105 (27%)
7tmF_FZD6 188..508 CDD:320160 84/325 (26%)
TM helix 1 198..222 CDD:320160 8/23 (35%)
TM helix 2 231..252 CDD:320160 7/20 (35%)
TM helix 3 283..305 CDD:320160 3/21 (14%)
TM helix 4 326..342 CDD:320160 5/15 (33%)
TM helix 5 364..387 CDD:320160 6/22 (27%)
TM helix 6 418..440 CDD:320160 8/21 (38%)
TM helix 7 469..494 CDD:320160 2/24 (8%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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