DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz3 and Fzd3

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_703204.1 Gene:Fzd3 / 266715 RGDID:628814 Length:666 Species:Rattus norvegicus


Alignment Length:522 Identity:123/522 - (23%)
Similarity:203/522 - (38%) Gaps:128/522 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELMEL----WPSFL 204
            |::...|||..|..||:...|:|. :..|....|:.||:....||     .:|||:    ||..:
  Rat    67 PMVNLDCSRDFRPFLCALYAPICM-EYGRVTLPCRRLCQRAYSEC-----SKLMEMFGVPWPEDM 125

  Fly   205 NCDGLPQPEKHELCMQIPQEVAVPGGSPSGPPTTGSP-GVEDHPQTYRFWKSGASPTSDLAGVLC 268
            .|...|..::     ..|:.|.:   :..|.||.|:| .|:   :.|.||              |
  Rat   126 ECSRFPDCDE-----PYPRLVDL---NLVGDPTEGAPVAVQ---RDYGFW--------------C 165

  Fly   269 PQNFSGSP------FNPEECVPQCQRDAFHTSSQKKTSETLILGL-SAVCFVLTLFALVTFWAEP 326
            |:.....|      .:..:|.|.|....|.  .::.:.....:|| |.:|...||...:||..:.
  Rat   166 PRELKIDPDLGYSFLHVRDCSPPCPNMYFR--REELSFARYFIGLISIICLSATLVTFLTFLIDV 228

  Fly   327 TRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDVELQWRLMRPGCLLTPP---------- 381
            |||.|||||::|..:||.:.|:.:....:..:              |..|..:.|          
  Rat   229 TRFRYPERPIIFYAVCYMMVSLIFFIGFLLED--------------RVACNASSPAQYKASTVTQ 279

  Fly   382 ------CLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALEKRSGLFHVLAWVPPLAPPI 440
                  |...::...:.::..:.||:|..:.::|::..||.|||:||::.|||..||..|....|
  Rat   280 GSHNKACTMLFMVLYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKALLFHASAWGIPGTLTI 344

  Fly   441 AALLLEKVRPSELTGMCYAPGFVELPAL---------------VLLLLGLYFTLRASRSLLSLQQ 490
            ..|.:.|:....::|:|:. |..::.||               |.|||....:|...|..:.|::
  Rat   345 ILLAMNKIEGDNISGVCFV-GLYDVDALRYFVLAPLCLYVVVGVSLLLAGIISLNRVRIEIPLEK 408

  Fly   491 QLQPTLAHHRFGQIRKRFVLFSLLYFAPTTAGV-----------------VAALCERYADSVP-- 536
            :.|..|.     :...|..:||:||..|....:                 :...|..|....|  
  Rat   409 ENQDKLV-----KFMIRIGVFSILYLVPLLVVIGCYFYEQAYRGIWETTWIQERCREYHIPCPYQ 468

  Fly   537 --SCSTPDDCLSPTPLSAWPALVRIFFQLVGGTLTGLWVWSRKTCESYRNRLGASGTPTSSLMNQ 599
              ..|.||..|         .|::....|:.|..:..||.|:|||..:.:..  .|......:|:
  Rat   469 VTQMSRPDLIL---------FLMKYLMALIVGIPSIFWVGSKKTCFEWASFF--HGRKKKETVNE 522

  Fly   600 SK 601
            |:
  Rat   523 SR 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 23/83 (28%)
Frizzled 291..584 CDD:279827 81/345 (23%)
Fzd3NP_703204.1 CRD_FZ3 24..150 CDD:143558 25/96 (26%)
Frizzled 193..512 CDD:279827 81/351 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334857
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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