DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz3 and fzd4

DIOPT Version :10

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_002936589.1 Gene:fzd4 / 100497693 XenbaseID:XB-GENE-478210 Length:523 Species:Xenopus tropicalis


Alignment Length:489 Identity:140/489 - (28%)
Similarity:222/489 - (45%) Gaps:79/489 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 DEKGQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELME 198
            |.:.|:....|||:.|||.:.:|.|||...|:||..:..|:..|..:|.:|:..|    .|.|.|
 Frog    60 DAELQLTTFTPLIQYGCSSQLQFFLCSVYVPMCTEKINIPIGPCGGMCLSVKRRC----EPVLKE 120

  Fly   199 L---WPSFLNCDGL-PQPEKHELCMQIPQEVAVPGGSPSGPPTTGSPGVEDHPQTYRFWKSGASP 259
            .   ||..|||... ||.:.:.:||:.|.:..||..|    .|...|| ||        .:...|
 Frog   121 FGFAWPESLNCSKFPPQNDHNHMCMEGPGDDEVPVHS----KTPVLPG-ED--------CNSFGP 172

  Fly   260 TSD-LAGVLCPQNFSGSPFNPEECVPQCQRDA-FHTSSQKKTSETLILGLSAVCFVLTLFALVTF 322
            .|| ...|....|          ||.:|..|: .::...|:.::..:...:::||:.|.|.::||
 Frog   173 NSDQYTWVKRSMN----------CVLKCGYDSGLYSRLSKEFTDIWMAVWASLCFISTAFTVLTF 227

  Fly   323 WAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDVE-------LQWRLMRPGCLLTP 380
            ..:.:||.|||||::||.:|||::|:.|:.|:....:....|.|       :|..|...||.:. 
 Frog   228 LIDSSRFCYPERPIIFLSMCYNIYSIAYIVRLTVGRERISCDFEEAAEPVLIQEGLKNTGCAII- 291

  Fly   381 PCLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALEKRSGLFHVLAWVPPLAPPIAALLL 445
                 ::...:..:.::.||:|..|.::|::..||..||:|..|..||:.||..|....|..|::
 Frog   292 -----FLLMYFFGMASSIWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIM 351

  Fly   446 EKVRPSELTGMCYA--------PGFVELPALVLLLLGLYFTLRASRSLLSLQQQLQPT-LAHHRF 501
            ..|...||||:||.        .|||..|....|::|..|......:|..::..||.. ....:.
 Frog   352 RLVDADELTGLCYVGNQNIDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQKDGTKTDKL 416

  Fly   502 GQIRKRFVLFSLLYFAPTTAGVVAALCE-------RYADSVPSCSTPDDCLSPTPLSAWPALVRI 559
            .::..:..:||:||..|.|..:.....|       ||        |.||.      :....::.|
 Frog   417 ERLMVKIGVFSVLYTVPATCVIACYFYEISNWNVFRY--------TADDS------NMAVEMLNI 467

  Fly   560 FFQLVGGTLTGLWVWSRKTCESYR---NRLGASG 590
            |..|:.|..:|:|:||.||..:::   |||..||
 Frog   468 FMSLLVGITSGMWIWSAKTLHTWQKCTNRLVNSG 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM_1 22..83 CDD:425453
CRD_FZ <138..224 CDD:470581 32/89 (36%)
7tmF_FZD3_insect 290..587 CDD:320159 87/323 (27%)
TM helix 1 299..324 CDD:320159 6/24 (25%)
TM helix 2 333..354 CDD:320159 10/20 (50%)
TM helix 3 383..409 CDD:320159 4/25 (16%)
TM helix 4 426..442 CDD:320159 6/15 (40%)
TM helix 5 469..493 CDD:320159 4/23 (17%)
TM helix 6 513..540 CDD:320159 7/33 (21%)
TM helix 7 548..573 CDD:320159 5/24 (21%)
fzd4XP_002936589.1 CRD_FZ4 28..153 CDD:143557 33/96 (34%)
7tmF_FZD4 195..495 CDD:320166 85/319 (27%)
TM helix 1 204..229 CDD:320166 6/24 (25%)
TM helix 2 238..259 CDD:320166 10/20 (50%)
TM helix 3 289..315 CDD:320166 4/31 (13%)
TM helix 4 332..348 CDD:320166 6/15 (40%)
TM helix 5 370..399 CDD:320166 7/28 (25%)
TM helix 6 419..446 CDD:320166 7/26 (27%)
TM helix 7 456..481 CDD:320166 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.

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