DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz3 and smo

DIOPT Version :9

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_002931911.2 Gene:smo / 100491644 XenbaseID:XB-GENE-487420 Length:815 Species:Xenopus tropicalis


Alignment Length:627 Identity:134/627 - (21%)
Similarity:208/627 - (33%) Gaps:179/627 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LKANCCV-----YAPPKKKRMIAWSDADDVSIVERNEDEDDDDYKSDDEKGQIAKLVPLIESG-- 149
            ||.|.|:     ||      :.:...|:|.|..|...|                ||  |:.||  
 Frog    46 LKYNVCLGSVLPYA------LTSTVLAEDSSTQEEIHD----------------KL--LLWSGLR 86

  Fly   150 ----CSRRARFLLCSSLFPLC---TPDVPRPVAACKLLCETVRGEC----MENAPPELMELWPSF 203
                |....|.|||:...|.|   ..::|     .:.||:|.|..|    .|..       ||.|
 Frog    87 NAPRCWDAIRPLLCAVYMPKCEGGKVELP-----SQSLCQTTRVPCAIVARERG-------WPDF 139

  Fly   204 LNC--DGLPQPEKHELCMQIPQEVAVPGGSPSGPPTTGSPGVEDHPQTYRFWKSGASPTSDLAGV 266
            |.|  |..|.                              |..:..||.:|..||...    |.:
 Frog   140 LKCTTDHFPD------------------------------GCSNEIQTVKFNSSGQCE----APL 170

  Fly   267 LCPQNFSGSPFNPEECVPQCQRDAFHTSSQKKTSETLILGLSAVCFVLTLFALVTF---WAEPTR 328
            :...|......:.|.|..|||...| |..:.:.....|...|:|....|.|.|.||   |....|
 Frog   171 VRTDNPKSWYEDVEGCGIQCQNPLF-TKKEHREMHVYIAIFSSVTIFCTFFTLATFLSDWKNSNR 234

  Fly   329 FGYPERPVLFLCLCYNLFSVCYL--------ERIVFHNQARMHDVELQWRLMRPGCLLTPPCLAS 385
              ||...:.::..|:.:.|:.:|        :.||......|       ||..|....|..|:..
 Frog   235 --YPAVILFYVNACFFVGSIGWLAQFMDGARDEIVCRGDGTM-------RLGEPTSNETLSCVII 290

  Fly   386 YITTSYLSLCAASWWLIFALCFYLS------SHKKWSSEALEKRSGLFHVLAWVPPLAPPIAALL 444
            ::...|..:....|:::....::.|      :|     :.|..::..||::.|..|....:|.|.
 Frog   291 FVIVYYAMMSGVIWFVMLTYAWHTSFKALGTTH-----QPLSGKTSYFHLITWSIPFVLTVAILA 350

  Fly   445 LEKVRPSELTGMC--------YAPGFVELPALVLLLLGLYFTLRASRSLLSLQQQLQPTLAHHRF 501
            :.:|....::|:|        |..|||..|..::|::|.||.:|...:|.|::......|:....
 Frog   351 VAQVDGDSVSGICFVGYKNYHYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAA 415

  Fly   502 GQIRK---RFVLFSLLYFAPTTAGVVA-----------------------ALCERYADSVPSCST 540
            .:|.:   |..:|..|.|     |.|.                       .|||.........:.
 Frog   416 SKINETMLRLGIFGFLAF-----GFVLITFGCHFYDFFNQAEWERSFREYVLCEANVTIAEQTNK 475

  Fly   541 P-DDCLSPTPLSAWPALVRIFFQLVGGTLTGLWVWSRKTCESYRNR----LGASGTPTSSLMNQS 600
            | .:|......|.....:.:|.....|.....|||::.|...::..    ||.|......:....
 Frog   476 PIPECEIKNRPSLLVEKINLFAMFGTGISMSTWVWTKATIIIWKRAWCRILGRSDDEPKRIKKSK 540

  Fly   601 KAAGAL---------PKKHLYTSGKSMLPTGGITPLYAGISF 633
            ..|.|.         |:|.|..|..::...|.:    ||::|
 Frog   541 MIAKAFSKRKELLNNPEKELSFSLHTVSHEGPV----AGLNF 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM <19..>122 CDD:223796 10/34 (29%)
RRM_1 22..83 CDD:278504
CRD_FZ <138..224 CDD:295308 26/100 (26%)
Frizzled 291..584 CDD:279827 71/344 (21%)
smoXP_002931911.2 CRD_SMO 39..169 CDD:143560 43/192 (22%)
7tmF_SMO_homolog 193..523 CDD:320158 71/349 (20%)
TM helix 1 202..227 CDD:320158 8/24 (33%)
TM helix 2 237..258 CDD:320158 3/20 (15%)
TM helix 3 288..314 CDD:320158 2/25 (8%)
TM helix 4 332..348 CDD:320158 4/15 (27%)
TM helix 5 370..399 CDD:320158 10/28 (36%)
TM helix 6 421..448 CDD:320158 6/31 (19%)
TM helix 7 484..509 CDD:320158 3/24 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D509772at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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