DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz3 and corin

DIOPT Version :10

Sequence 1:NP_001096859.1 Gene:fz3 / 31023 FlyBaseID:FBgn0027343 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_021325728.2 Gene:corin / 100320926 ZFINID:ZDB-GENE-060224-3 Length:1036 Species:Danio rerio


Alignment Length:477 Identity:91/477 - (19%)
Similarity:138/477 - (28%) Gaps:194/477 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 AKLVP-LIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKLLCETVRGECMENAPPELMELWPSF 203
            :.|.| |:::.|.:...|..|:.|.|:|.|...:.|..|:.||...:..|            .|.
Zfish   485 SSLFPALVQTNCYKYLMFFACTVLVPMCDPVTQQRVPPCRSLCRNSKDRC------------ESV 537

  Fly   204 LNCDGLPQPEKHELCMQIPQEVAVPGGSPSGPPTTGSPGVEDHPQTYRFWKSGASPTS------- 261
            |...||..||..: |.|.|:|     |..:.......|.|.:...::...:||....|       
Zfish   538 LGIVGLQWPEDTD-CAQFPEE-----GQANSSCLLPDPDVNECSPSHFKCRSGRCVLSSKRCDGH 596

  Fly   262 ---------DLAGVL------CPQNFSGSPFNPEECVPQCQRDAFHTSSQKKTSETLILGLSAVC 311
                     ::.|.|      ||        ..:.|:|.                      |.:|
Zfish   597 TDCDDDSDEEMCGCLERGLWECP--------GDKSCIPH----------------------SMIC 631

  Fly   312 FVLTLFALVTFWAEPTRFGYPERPVLFLCLCY---NLFSVCYLERIVFHNQARMHDVELQWRLMR 373
                             .|:|:      |..:   |..|.|....:..:|...:|  ...|...|
Zfish   632 -----------------DGFPD------CSQHEDENNCSACSSHELECNNHECVH--RALWCDGR 671

  Fly   374 PGCLLTPPCLASYITTSYLSLCAASWWLIFALCFYLSSHKKWSSEALEKRSGL-FHVLA--WVPP 435
            ..|                |..:..|     .|..||.    ....|..::|| :||.|  |.| 
Zfish   672 RHC----------------SDSSDEW-----NCVSLSD----EGSLLVYKAGLEYHVCADGWSP- 710

  Fly   436 LAPPIAALLLEKVRPSELTGMCYAPGFVELPALVLLLLGLYFTLRASR-----------SLLSLQ 489
                         ..|.:|  |...| :..|.....:|.:...:|..|           ::|.||
Zfish   711 -------------NHSSVT--CTQMG-LGSPLSTDAMLDVSPVVRRKRWLHVDPDWSPENMLPLQ 759

  Fly   490 QQLQPTLAHHRFGQIRKRFVLFSLLYFAPTTAGVVAALCERYADSVPSCSTPDDCLSPTPLSAWP 554
                        |.:.||                 ...|:.|......| |.|:|      ...|
Zfish   760 ------------GLLEKR-----------------GQSCQSYKKISLQC-TRDEC------GRRP 788

  Fly   555 ALVRIFFQLVGGTLT--GLWVW 574
            | .|:..:::||..:  |.|.|
Zfish   789 A-ARLVKRILGGRTSRPGRWPW 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz3NP_001096859.1 RRM_1 22..83 CDD:425453
CRD_FZ <138..224 CDD:470581 24/84 (29%)
7tmF_FZD3_insect 290..587 CDD:320159 54/304 (18%)
TM helix 1 299..324 CDD:320159 2/24 (8%)
TM helix 2 333..354 CDD:320159 4/23 (17%)
TM helix 3 383..409 CDD:320159 3/25 (12%)
TM helix 4 426..442 CDD:320159 6/18 (33%)
TM helix 5 469..493 CDD:320159 6/34 (18%)
TM helix 6 513..540 CDD:320159 3/26 (12%)
TM helix 7 548..573 CDD:320159 6/26 (23%)
corinXP_021325728.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.