DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL22 and RPL22A

DIOPT Version :10

Sequence 1:NP_477134.1 Gene:RpL22 / 31022 FlyBaseID:FBgn0015288 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_013162.1 Gene:RPL22A / 850750 SGDID:S000004051 Length:121 Species:Saccharomyces cerevisiae


Alignment Length:115 Identity:50/115 - (43%)
Similarity:74/115 - (64%) Gaps:0/115 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 KKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHF 249
            :|:|::..||:|.::..|:.:.|.|.:.||:...:||.|.|.||||.||.......:.|.|...|
Yeast     7 RKQKIAKTFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNLGNAVTVTEDGTVVTVVSTAKF 71

  Fly   250 SKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFRISSNDDEDDDAE 299
            |..|||||||||||||.||||||.|:.:.:.|.|.:::::..:||::|.|
Yeast    72 SGKYLKYLTKKYLKKNQLRDWIRFVSTKTNEYRLAFYQVTPEEDEEEDEE 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL22NP_477134.1 Ribosomal_L22e 193..289 CDD:460321 44/95 (46%)
RPL22ANP_013162.1 Ribosomal_L22e 15..110 CDD:460321 44/94 (47%)

Return to query results.
Submit another query.