DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL22 and AT1G02830

DIOPT Version :10

Sequence 1:NP_477134.1 Gene:RpL22 / 31022 FlyBaseID:FBgn0015288 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_171782.1 Gene:AT1G02830 / 838098 AraportID:AT1G02830 Length:127 Species:Arabidopsis thaliana


Alignment Length:116 Identity:62/116 - (53%)
Similarity:84/116 - (72%) Gaps:7/116 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 GKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSS 245
            |.|.|||.||  |.|||:...:|:|:::|..||:::.|:||.||...|||:|:..|...|:.|::
plant    10 GAGAKKKGVS--FVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNA 72

  Fly   246 DVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDS--YELRYFRISSNDDE 294
            :.:|||.||||||||||||.:||||:||:|:.||.  ||:|||||   |||
plant    73 NSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRI---DDE 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL22NP_477134.1 Ribosomal_L22e 193..289 CDD:460321 51/97 (53%)
AT1G02830NP_171782.1 Ribosomal_L22e 20..120 CDD:460321 53/102 (52%)

Return to query results.
Submit another query.