DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL22 and AT3G05560

DIOPT Version :10

Sequence 1:NP_477134.1 Gene:RpL22 / 31022 FlyBaseID:FBgn0015288 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_187207.1 Gene:AT3G05560 / 819722 AraportID:AT3G05560 Length:124 Species:Arabidopsis thaliana


Alignment Length:118 Identity:65/118 - (55%)
Similarity:87/118 - (73%) Gaps:5/118 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 KGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSD 246
            || |||.||  |||||:...:|.||::|..||:::.|:||.||...||::||..|.|.|:.|::|
plant    10 KG-KKKGVS--FTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTAD 71

  Fly   247 VHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDS--YELRYFRISSNDDEDDD 297
            ..|||.||||||||||||:::|||:||:|..||.  ||||||.|:.|:.|::|
plant    72 GQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL22NP_477134.1 Ribosomal_L22e 193..289 CDD:460321 54/97 (56%)
AT3G05560NP_187207.1 Ribosomal_L22e 18..118 CDD:460321 55/99 (56%)

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