DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL22 and Rpl22l2

DIOPT Version :10

Sequence 1:NP_477134.1 Gene:RpL22 / 31022 FlyBaseID:FBgn0015288 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001395786.1 Gene:Rpl22l2 / 680575 RGDID:1590585 Length:122 Species:Rattus norvegicus


Alignment Length:118 Identity:65/118 - (55%)
Similarity:89/118 - (75%) Gaps:2/118 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 KGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSD 246
            |.:|.||.:.||.:|.|:..||.|.|..:||::::.::|||||..||||.|..||.|.|:.|.|:
  Rat     5 KDKKPKKSTWRFHLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERLKNKITVVSE 69

  Fly   247 VHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFRISSNDD--EDDD 297
            ..|||.|||:|||||||||:||||:||||::|::||||||:||.::|  |.:|
  Rat    70 KQFSKRYLKHLTKKYLKKNNLRDWLRVVASDKETYELRYFQISQDEDGSESED 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL22NP_477134.1 Ribosomal_L22e 193..289 CDD:460321 55/95 (58%)
Rpl22l2NP_001395786.1 Ribosomal_L22e 16..114 CDD:460321 57/97 (59%)

Return to query results.
Submit another query.