DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL22 and RpL22-like

DIOPT Version :10

Sequence 1:NP_477134.1 Gene:RpL22 / 31022 FlyBaseID:FBgn0015288 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_611771.1 Gene:RpL22-like / 37684 FlyBaseID:FBgn0034837 Length:312 Species:Drosophila melanogaster


Alignment Length:316 Identity:138/316 - (43%)
Similarity:170/316 - (53%) Gaps:43/316 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TAKTNKGDTKTAAAKPAEKKAAPAAAAAKGKVEKPKA-------EAAKPAAAAAKNVKKA-SEAA 60
            |.|.|....|:.|. |...|.|||..... :...|.|       :.||..|.|.||:..| .|:|
  Fly     5 TQKKNASKAKSKAG-PQPSKKAPAKVTPV-ETATPSAAPPLSSKKVAKAPAVALKNLDLAMKESA 67

  Fly    61 KDVKAAAAAAKPAAAKPAAAKPAAASKDAGKKAPAAAAPKKDAKAAAAPAPAKAAPAKKAASTPA 125
            |  |||.||.:...:|  |.|...||:....:.|...||:.|.|..:||      |.:..|..|.
  Fly    68 K--KAAEAADQKLVSK--AKKGQNASRKNLMQVPEPVAPEVDNKKKSAP------PKRGNAEIPT 122

  Fly   126 AAPPAKKAA--PAKAAAPAAAAP------APAAAAPAVAK----PA-PKPKAKAAPAPSKVVKKN 177
            .. ||||||  ..|....|||||      .|||.|.:|.|    || ||||.|..        ||
  Fly   123 VV-PAKKAALVQEKPKEQAAAAPKAENVEVPAAKAKSVKKSLATPANPKPKPKRT--------KN 178

  Fly   178 VLRGKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSK-LKL 241
            |||||...|||...||.|||..:|||.|:|:||||:|:|..:|:..|:|.|.:.|||||:| ..|
  Fly   179 VLRGKRLAKKKAWQRFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSL 243

  Fly   242 IVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFRISSNDDEDDD 297
            |:.|.|||||.|.|||||:||||.|||||:|||:..||::.:.||:|...|.:|||
  Fly   244 IIHSGVHFSKRYFKYLTKRYLKKVSLRDWLRVVSTAKDTFAMTYFKIQDKDFDDDD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL22NP_477134.1 Ribosomal_L22e 193..289 CDD:460321 55/96 (57%)
RpL22-likeNP_611771.1 LGT <20..189 CDD:469786 69/188 (37%)
Ribosomal_L22e 194..291 CDD:460321 55/96 (57%)

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