DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL22 and rpl-22

DIOPT Version :10

Sequence 1:NP_477134.1 Gene:RpL22 / 31022 FlyBaseID:FBgn0015288 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_494932.1 Gene:rpl-22 / 173873 WormBaseID:WBGene00004434 Length:130 Species:Caenorhabditis elegans


Alignment Length:141 Identity:71/141 - (50%)
Similarity:92/141 - (65%) Gaps:14/141 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 PKPKAKAAPAPSKVVKKNVLRGKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGK 224
            |||.||:|        |..||     ||||.|:|.::|.|..||.|:.:.|.|.::..::|||||
 Worm     3 PKPHAKSA--------KKALR-----KKKVHLKFNVECKNPVEDGILRIEDLEAFLNEKIKVNGK 54

  Fly   225 VNNL-GNNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFRI 288
            ..:| .|||..|.:|.|:.|.|:|.|||.|||||||||||:||||||:||||..|::||:|||.|
 Worm    55 TGHLAANNVKVEVAKSKVSVVSEVPFSKRYLKYLTKKYLKRNSLRDWLRVVAVNKNTYEVRYFHI 119

  Fly   289 SSNDDEDDDAE 299
            :..:|...|.|
 Worm   120 NDGEDAGSDHE 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL22NP_477134.1 Ribosomal_L22e 193..289 CDD:460321 53/96 (55%)
rpl-22NP_494932.1 Ribosomal_L22e 23..122 CDD:460321 54/98 (55%)

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