DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5273 and CG31706

DIOPT Version :10

Sequence 1:NP_569857.1 Gene:CG5273 / 31021 FlyBaseID:FBgn0040382 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_723675.1 Gene:CG31706 / 261621 FlyBaseID:FBgn0051706 Length:351 Species:Drosophila melanogaster


Alignment Length:450 Identity:120/450 - (26%)
Similarity:148/450 - (32%) Gaps:155/450 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AW--ALFALLLTHGGDNVVDARRNQGNQRKTSSSSSSSNYGHVTQPSYNTNGHAAGNSHADVAKL 78
            :|  ||..|||........|||..:|.                       .|.:.|.......|.
  Fly     3 SWYLALSLLLLAASTIQPTDARGGRGR-----------------------GGGSFGGLFGGWRKY 44

  Fly    79 SYPNYNSQPNRPMAAGSSGSPGSAPQPGWNVPQGPPPAYSASNPAGGARPNMHEPPPAYHAPNY- 142
            ..|:.:....|.:    ||||   ......||:.|||.        .|.|.|...||....|:| 
  Fly    45 KKPSSSGGGRRVV----SGSP---VHTAMTVPKPPPPP--------PAPPKMPMMPPKQQIPSYP 94

  Fly   143 -GAAPPNYGAATGSNVHQPQYSGVPAGATYYPAAGPGSGYSPNIPAGATYYPSAGHVPMGGGYHP 206
             ...||.||..:                  ||  |.|||                          
  Fly    95 RQQMPPGYGFGS------------------YP--GQGSG-------------------------- 113

  Fly   207 AAAPPPGATYYQAGSALPPGATYYSAPPQQSSSGLGFG---TGLLAGG-LGGALLGHA-----LT 262
                    |||....|||.||.||:.||...:.|:|.|   ||:|||. :...|.||.     ..
  Fly   114 --------TYYANAQALPAGAVYYAQPPVGMNRGIGTGDFLTGMLAGHMMNNVLFGHRHHTYHRN 170

  Fly   263 PSGGSSSSQPVAAAPAAGQDR-IIIINNGVPVNASDGTTVINAAGVAAAPGAVPAAPVPSSNTTQ 326
            |..|.||.|        |..| |||:|||.........|.|:....|..|   |..|:...:..:
  Fly   171 PEEGQSSPQ--------GNGRQIIIVNNGQQEGVLHNETTISGESSAVVP---PENPLTEEDDVE 224

  Fly   327 -----DAQQPAVPMAPMPFNPETSNMTAPDPAAPPPPGGIICVPTKVNETDPADSTKMIEVEKIA 386
                 |....||       :.|.|..:...| .|.|.|||||.|..:|||||.:|..|.|||::.
  Fly   225 GQGEGDGGSEAV-------SSEESTESEATP-QPYPDGGIICFPIMLNETDPENSEVMREVERVV 281

  Fly   387 CYPAPPPPAASAGEGPAPLAPMAADQP------------------GSQQVQQVQQAQDVA 428
            |:||||       ..|....|....:|                  |..:|.......|||
  Fly   282 CFPAPP-------HNPGNFQPTITTEPPIVAGDIVGRADDGTEVGGGDEVSHAGTPVDVA 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5273NP_569857.1 hnRNP-L_PTB <99..>155 CDD:273733 17/57 (30%)
DUF4813 166..388 CDD:435117 72/236 (31%)
CG31706NP_723675.1 DUF4813 93..287 CDD:435117 80/266 (30%)

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